Gene Information

Name : ribD (XBJ1_1672)
Accession : YP_003467578.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1633762 - 1634871 bp
Length : 1110 bp
Strand : -
Note : -

DNA sequence : 
ATGACTCTCGATGAAAAATATATGTCCCGTGCGCTGGAACTGGCGAATCAGGGACGTTTTACGACATCTCCAAACCCGAA
TGTTGGATGTGTCATCGTTCAGGGCGATCACATTGTCGGTGAAGGTTTCCATGTATGTGCCGGTGAACCTCATGCAGAGG
TACATGCTCTCCGCATGGCCGGAGGCAAGGCAAAAGGGGCAACGGCTTATGTCACCCTTGAGCCGTGTAGTCACCACGGC
AAGACGCCTCCCTGTGCCGATGCGTTGATTGCAGCCGGTATCAGTCGTGTTGTGGCCGCTATGCAAGATCCTAATCCGCA
GGTTGCAGGGCGTGGTTTGTATAAATTGCAGCAGGCGGGGATTGCCGTTGAGCATGGCGTGTTGATGGCGGAGGCAGAAG
CGCTGAATAAGGGATTTCTCAAGCGTATGCGCACGGGATTCCCTTATTTGCAACTGAAAATGGGCGCGTCACTGGACGGA
CGTACTGCGCTGGCATCGGGTGAAAGCAAGTGGATTACGTCGCCAGAAGCCCGTCAGGATGTGCAGCAGTTCCGGGCGCA
ATGCAGTGCTATTCTCAGTTCCAGTGCCACGGTACTGGCAGATGATCCTTCATTAACTGTCCGCTGGCATGAATTGGATG
CCGAAATACAGGCGATTTATCCTCAAGAGCAAGTACGTCAGCCAATCCGGATCATTGTTGATAGCCAGAATCGCGTAACA
CCACAGCATCAAGTTGTACAGCAGGTGGGGCAATGTTGGTTAGCACGTACTCACACCGATCAGCAGCAGTGGCCTGACAA
TGTCGATCATATTGTATTGCCTGCCCACGGAGGAGGTGTTGATCTGGTTTTGCTGATGATGCAGCTTGGTAAACGTCAGA
TAAATTCGGTTTGGGCTGAATGTGGGCCTGTTTTGGCGGGAGCATTGTTATCACTGGGGCTAGTCGATGAATTAATCCTT
TATATAGCACCAAAAGTGCTGGGAAATACTGCCCGTGGGCTGTTTGCTATCCCTGAGTTACAAAAATTATCGGATGCGCC
TGAATTCACGCTGTTTGATGTCCGGCAGATTGGGTCTGATGTGCGTCTTCGCTTGCGGCCAGCGTCTTGA

Protein sequence : 
MTLDEKYMSRALELANQGRFTTSPNPNVGCVIVQGDHIVGEGFHVCAGEPHAEVHALRMAGGKAKGATAYVTLEPCSHHG
KTPPCADALIAAGISRVVAAMQDPNPQVAGRGLYKLQQAGIAVEHGVLMAEAEALNKGFLKRMRTGFPYLQLKMGASLDG
RTALASGESKWITSPEARQDVQQFRAQCSAILSSSATVLADDPSLTVRWHELDAEIQAIYPQEQVRQPIRIIVDSQNRVT
PQHQVVQQVGQCWLARTHTDQQQWPDNVDHIVLPAHGGGVDLVLLMMQLGKRQINSVWAECGPVLAGALLSLGLVDELIL
YIAPKVLGNTARGLFAIPELQKLSDAPEFTLFDVRQIGSDVRLRLRPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-60 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-60 47