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Name : topB (XBJ1_1548) Accession : YP_003467455.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 1503162 - 1505156 bp Length : 1995 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11395412; Product type e : enzyme DNA sequence : ATGCCACTGTATTTATGTGAAAAGCCCTCTCAGGCCAGAGATATCGCCCGGGTGCTGGGCGTGAAGCAGCGCGGACAGGG CTATCTCTTTGGCGACAGTATTACTGTCACCTGGGCTATCGGGCATTTGCTGGAAATGGCTGCACCCGAGCACTATGGTG AACAATTCGGCCCGCCGTGGCGCATGGAACCCCTGCCGGTGCTGCCTGTGCAGTGGCAATGGACTGTGAAGAAAGAGACC GCCGATCAGTTTGCGGTGATCAGACAATTACTGAAACAGGCCGACGAAGTGATTATCGCCACTGATGCTGACCGTGAAGG GGAAGTGATTGCCCGTGAACTGCTGGAGTATTGCCGTTTTACCGGCCCCGTCAGACGGCTGTGGCTGTCTGCGCTGGATG AAACCAGTATCCGGCAGGCACTGGCCGCGATATTACTGGGGGAGCAAACCGAACCACTCTGGCAGGCCGGACTGGGACGG GCACGGGCGGACTGGCTGATGGGAATAAACCTGACCCGCCTGTATACCCTGAAAGCGCAGGCACAGGGATTTGGTGAGGT GCTGTCCATCGGGCGGGTACAGACGCCGACACTGGCACTGGTCGTGAACCGTGATAACGATATCGCCCGGTTTGAGCCAA AACCCTACTGGCAGGTGATGGCCGCATTGCAAAAAGATGACATTAGCTTTCGGGTTAAATGGCTGCCTGCGCCCGACGAT TGCGATGAAGAAAAACGCTGTATCCGGGAGGATATCGCGCAGAGTGTGGTTCAGCGTTGTCAGCAGGCACAAGATGCCGT GGTGACTGAACTCACGCAGAAACGGGAAAAAACCCCGCCGCCGCTCTGTTTTGATTTGGGGATGCTCCAGCAGGTAGCCT CCCGTCAATGGGGAATGGGGGCCGGTCAGGTACTGACGATTGCCCAGTCGTTGTATGAAATCCATAAAGCGACCACCTAC CCGCGCACGGATTGCGGTTATCTGCCGGTTTCAATGCGGGAAGATATTCCGGCCGTGTTCACCGCACTGACCCGTACCGA TCCTGCGATGAATGCCATTATCAGCCAGCTGGATGCCAGCACTCTCTCCCGAGTCTGGAATGACAGCCAAATCACGGCGC ACCATGCCATTATTCCGACCCGCCACACTTTTGATATGACGAAACTGACCGCGGACGAATTAAAGATCTATCAGTTGATC CGCCACTATTATCTGGCGCAGTTTCTGCCCGTACAGGAAACGGATGTGACTGACGTGACATTCACTATCGGCGGGCAGGT ATTTCAGGCGAAAGGGCGGGTCAGTGTGGTCACGGGCTGGAAGACGCTGTTTGCCGATGAAAAACAGGTGCAGGAGCAGG ACGACAATACCGCGCTGCCTGCATTGAAAAAAGAGGAAATCTGCCCGGTACTCCGTGCAGAAATACAGCCCCGGCAAACC CGGCCGCCTGCGCCTTTTACCGAAGGTACGCTGATTGCCGCCATGAAAAATGCCGCTGCGTTTATCCACGATCCGCAGCT TAAAAAAGTGCTGCGGGAAAATGCCGGGCTGGGCACGGAGGCCACCCGGGCAGGTATCATTGAAGCCCTGTTTAACCGTC AGCTGCTGGCGCGAAAAAAGAAAAACCTGCATGCAACGCCGCTGGCGCAGGAGCTGATTGCCGGGCTGCCGGACGTCCTG ACCCATCCGGGGATGACTGCGCTGTGGGAACAGTCTCTGGACGACATTGCCCGGGGCCGGGCCACACTGGATGGCTTTAT GCAGAAACAGGCACAATGGCTGGCGCATTTAGTGGAAAAGGGCAAAACACAGCCGATCCGGTTTACCCTGCCGAAAACCC CGGCGTGCCCGCGCTGTGGCGGCCCGATGCAAAAACGGGCGGGAAAAACAACCCCGTTCTGGGGCTGCACTCGCTATCCG GCATGCAAAGGGATGCTGAACGCTAACGCGGTGACCGGCTCCCGAAAAACCCGGCGGGGAAATTCACCGGACTGA Protein sequence : MPLYLCEKPSQARDIARVLGVKQRGQGYLFGDSITVTWAIGHLLEMAAPEHYGEQFGPPWRMEPLPVLPVQWQWTVKKET ADQFAVIRQLLKQADEVIIATDADREGEVIARELLEYCRFTGPVRRLWLSALDETSIRQALAAILLGEQTEPLWQAGLGR ARADWLMGINLTRLYTLKAQAQGFGEVLSIGRVQTPTLALVVNRDNDIARFEPKPYWQVMAALQKDDISFRVKWLPAPDD CDEEKRCIREDIAQSVVQRCQQAQDAVVTELTQKREKTPPPLCFDLGMLQQVASRQWGMGAGQVLTIAQSLYEIHKATTY PRTDCGYLPVSMREDIPAVFTALTRTDPAMNAIISQLDASTLSRVWNDSQITAHHAIIPTRHTFDMTKLTADELKIYQLI RHYYLAQFLPVQETDVTDVTFTIGGQVFQAKGRVSVVTGWKTLFADEKQVQEQDDNTALPALKKEEICPVLRAEIQPRQT RPPAPFTEGTLIAAMKNAAAFIHDPQLKKVLRENAGLGTEATRAGIIEALFNRQLLARKKKNLHATPLAQELIAGLPDVL THPGMTALWEQSLDDIARGRATLDGFMQKQAQWLAHLVEKGKTQPIRFTLPKTPACPRCGGPMQKRAGKTTPFWGCTRYP ACKGMLNANAVTGSRKTRRGNSPD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 58 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 57 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 57 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 57 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 7e-160 | 48 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 2e-153 | 47 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 4e-149 | 47 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 5e-162 | 46 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 1e-125 | 41 |
