Gene Information

Name : XBJ1_1527 (XBJ1_1527)
Accession : YP_003467434.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1489064 - 1490494 bp
Length : 1431 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 15263089

DNA sequence :
ATGCAGGTTAAATCCAACAGTCTGGTGAAAATTCTGGTGCCGGTGGTGCTGATGGTTGGCGGATTTATCGGCATCAAAAG
TTGCAGTTCAACCGACACTGCCCCGCCCGCTACGCCGCAAAATAATGCCCTGGCCACCCTGTCACCGGAGGAGCTACAGG
CGCTGGGTGTCGGCGGTGATACGCCGGAAGATACCTTGCGTACGCTGGTGGGAACACTCAATAAAGTGCGGTCAGAGCAG
CAACGCTTAGGTCAGCAGAATGCCGATATCCTGAAAGAAAATGACCAGTTAAAAAATCAGCGTCAGGATGTCGCCGGTCA
GATAGACGCGGCGGTGGCAGCTATCCGGCAGGACGATGAACAGCGCCGGCGTGAATTACAGGATGAACAGCAGGGATTGC
TGGCACAGATTGATTTACTGACGGAACGCTTAAATTCAGCGCCTTTGTCTGCGCCGGACAGTCCGATACCGCCTGGGTCG
GGAAGTATTCCGTATTCTGCCAATGCAGGCACAGGGCAGAATGAACTTATCTGGATAGCACCCGCCGATGAAAAGCCCGC
AGACATACAAACCCCCGGCAGTGGAAAAGCCACGGCACAATTCCCGACCTCATTTTTAAGTGAACAGTCAGCCGCCGGGC
AAAATAAGCCCCAAAGCCCATCACTTCAAAACCCATCAAAGGAAGAAAATGAAAAGCCGGTCTATACCCTGCCTGAAAAT
GCCACGTTAGTCGGTAGTCAGGCCATGACGGCGTTATTAGGTCGGGTGCCAGTTAATGGCACAGTCACCGACCCCTATCC
GTTCAAAATCCTTATCGGCAAAGATAACCTGACGGCCAACGGCATTGAACTGCCGGAGGTGGAAGGGGCGGTGGTATCCG
GCTCTGCCAGTGGTGACTGGACGCTTTCCTGTGTGCGCGGTCAGGTTAATTCCATCACGGTTGTTTTTCAGGATGGCACG
GTGCGTACCCTGCCGGGCAGCGGGCAAAACAACAATACCAGCGCGAACGGCATCGGCTGGCTGTCCGATGAAAACGGCAT
TCCCTGTATCAGCGGTGAGCGCAAATCCAACGCCGCCACCTATCTGCCGACCCTGTTTGCGCTCTCGGCCATGAATTCGG
CTGGCGATGCCCTGAGTGAAAGTCAGCGTACTGCTCAGACCAGCGGCACAGGCGGTATCACCACGGCGTTAACGGGCAAT
GCCGGACAGGCCGCATTAGGCAAAGCGATGTCAGGTGGCATGAATGACCTGAGCGAATGGCTCAGACAGCGCTACAGCCA
GACATTTGATGCGGTTTACGTCCCGCCCGGTGCCCGGTTAGTGGTGCATATCACACAACGCCTGGCAATTGATTACGAAG
TGAAAGGACGTAAGGTGCGCTACGGCGTGAGTGAGACCGCCGAACGTGATAATCAGGAAGCATTAGATTAA

Protein sequence :
MQVKSNSLVKILVPVVLMVGGFIGIKSCSSTDTAPPATPQNNALATLSPEELQALGVGGDTPEDTLRTLVGTLNKVRSEQ
QRLGQQNADILKENDQLKNQRQDVAGQIDAAVAAIRQDDEQRRRELQDEQQGLLAQIDLLTERLNSAPLSAPDSPIPPGS
GSIPYSANAGTGQNELIWIAPADEKPADIQTPGSGKATAQFPTSFLSEQSAAGQNKPQSPSLQNPSKEENEKPVYTLPEN
ATLVGSQAMTALLGRVPVNGTVTDPYPFKILIGKDNLTANGIELPEVEGAVVSGSASGDWTLSCVRGQVNSITVVFQDGT
VRTLPGSGQNNNTSANGIGWLSDENGIPCISGERKSNAATYLPTLFALSAMNSAGDALSESQRTAQTSGTGGITTALTGN
AGQAALGKAMSGGMNDLSEWLRQRYSQTFDAVYVPPGARLVVHITQRLAIDYEVKGRKVRYGVSETAERDNQEALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 6e-110 52
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 2e-103 49
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 1e-102 48
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 1e-102 48
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 2e-103 48
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 3e-96 48
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-78 42