Gene Information

Name : XBJ1_1524 (XBJ1_1524)
Accession : YP_003467431.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 1485554 - 1488319 bp
Length : 2766 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGGAAAAACTCAAGGCACTGAACCGCCCCGGCAAGCTGCGTGAAGCGGATGAAGCCGCCATTTATCAGGCCAATCCTTC
TATTATTGATTACCTGCCCTGGGTGGAATATCTGGAAAAAGAACAATGCCTGCTGCTGGATGACGGGATTTCCGTTGGCG
CGGTCTATCAGATTGAATCCATTGCCACCGAAGGCCGTCCCGCTGAGCGGTTGACTGAAATCCGGGATCAACTGGAAGAT
GCGATCCAGGACAGTCTGGAAGAAGATGATATTTCGCCGTGGGTGGTGCAGTTTTTTTGTCAGGATGACGATGATCCTGC
TGACTATCTCAACACCTTGCGGGGCTATGTGAAACCCTGGGCACAGGGAACACTGTTTACTGACGCCTTTCTGACGGAAT
CAGAGTATCACCTGAACAGCATTGCCCGGCCTGACGGGATATTTCAGGACAGCTTAATCACCGGGCAACCGTGGCGGGGC
CAGCAACGCCAGACCCGTATGGTGGTTTACCGGTGGCTTCCGCCCACGCGAAAATCCCGCCATGACAGCCAAACTTTATC
GGCTGTTGCCGCCCTTAATCAGGTTTGCGAGCGGCTGGTCTCATCACTGGCTTCTGCCGGTGTGATTGCCCGCCGACAAC
ATGGCGGGCAGATCCACCGTTGGTTGCTGCGTCATTTTAATCCGGCGCCGGACTGGGGGATGGCAAAAGCCGATTTTTAC
CGTACCGTCAGTTATGAAGCCCCTATACAATCGGATCTCCCCGTCAGTAATGACTTTGCCGAAAGCCTGTGGTTCACCCC
GCCGGTGTCTGATCCCGACGCGGGCGTCTGGTGGTTTGACGGGTTACCGCATAAAGCGGTGCTGGTTGAGCGTCTGCGCC
GTCCGCCGGAACCGGGGACACTGACAGGCGAAGTGAAACGGGGCGACAATATCAATGCCCTGATGGACATGATGCCGGCA
GGGACGGTGGTTTCGCTGACCATTGTGGCGCAGGCACAGGACAGGCTGGAAGAGGATTTTACCCGGCTGACGAAAAATGC
GGTGGGAGAAAATACTGAATCGCTGCGCGTCCGGCAGGATGTGCAGGAAGTGAAAGAACTTCTGGGGCGGCGGCATAAAT
TGTACCGCAGTGCGCTGGCCTTTCTGGTGAGGGGCAAGGATCTGGATGATATAAACCACCGGGTGCATCAATTATCCTCC
ACCCTGCTGACAGCCGGATTACAGCCCGTCCGGCCGGAATTCAGTGTGTCACCGCTGAATGCCTACTTACGGGCACTGCC
GATGTGCTTTAACCCGCAGAAAGACAAAAAACACGGGTACAGCCGCCTGACCTGGGTACAGCATCTGGCCGGGTTATTGC
CGGTGACAGGCCGTTCGACCGGCACCGGGCATCCGGGGTTCAGTTTTTTTAACCGGGGCGGCGCTCCATTGACCTTCGAT
CCGATGAACAAACAGGATCGCACCCAGAATGCCCACTTATTGCTGTTTGGCCCGACAGGCGCAGGCAAATCCGCCACCCT
GTGTGCCGCGCTTATCCAGTTAATGGCGATACACCGACCGCGCTTGTTTATTGTCGAAGCCGGTAACAGTTTTGGCCTGC
TGGCCGATTACTACGAAAGCCTGGGGCTGACCGTCAATAAAATCGGCATCAGGCCGGGCTGTGGGGTCAGTCTGGCCCTG
TTTGCCGATGCCCATCAGCTGTTGCAACTGAGTCCCCGGCAATTGCGCATTAATGAAGCCGATATCCCCGATACCGATGA
ACAACAAGAAGATGAGGGGGATGAACAGCGCGATATCCTGGGCGAAATGGAAATTGCCGCCCGACTGATGATCACCGGTG
GTGAGAAAAGAGAAGAAGAACGCCTGACCCGCTCTGATCGCGGTTTAATTCGTGAGGCCATTATGATGGCGGCGCAGACC
AGCTTTAACGAGAAACGCCAGATGGTGGCCTCGGATTTACAGAATGCCCTTTATGCCATCGCCCGTAATCACCGGCAGGA
TGAACACGGCCAGCCGTTAATCACCGCTCACCGACGGGCACGGGCAGATGAAATGGCCAGCGCCATGTCGATGTTTACGC
AGGGGTTCGAGGGTGAACTGTTTAACCGTCCCGGTACGCCGTGGCCGGAAGTGGATGTCACCCTGATTGATTTGGGCACA
CTGGCACGGGAGAACTACTCGGCGCAAATGGCACTGGCGATGGTCTCGCTGATTAACAAAGTCAATAACCTGGCTGAACG
GGATCAATATCAGGATCGCGAACTGCAACTGGTGATTGATGAAGGGCATATCACCACCACCAATCCACTGTTATCACCCT
ATATGACTAAAGTGGTCAAAATGTGGCGTAAACTGGGGGCCTGGCTGTGGCTCGCCACCCAAAACCTGGCGGATTACCCC
GATACTGCTGAAAAGATGCTGAATATGGCTGAATGGTGGCTGTGTCTGACCATGCCACCCGATGAGGTGGAGCAAATCGC
CCGCTTTAAGAAGCTGACCGAAGAGCAGAAAGCGGTGCTGCTCTCTGCCAGTAAATTACCCCGTTGTTATACCGAAGGCG
TGGTGCTGGCAAAGAAAATCGAAGCCTTATTCCGGGTTGTACCCCCGAGCCTGTATCTGGCGCTGGGCATGACAGAAAAA
GAAGAAAAAGCCGAACGGCGGGCATTGATGCGGGAACATCAGTGCAGTGAACTGGAAGCCGCTGTTTTGGTGGCCAGAAA
AATGGATATCGCACGGGGATTAAAGGTTGATTCCGGTTCTGTATGA

Protein sequence :
MEKLKALNRPGKLREADEAAIYQANPSIIDYLPWVEYLEKEQCLLLDDGISVGAVYQIESIATEGRPAERLTEIRDQLED
AIQDSLEEDDISPWVVQFFCQDDDDPADYLNTLRGYVKPWAQGTLFTDAFLTESEYHLNSIARPDGIFQDSLITGQPWRG
QQRQTRMVVYRWLPPTRKSRHDSQTLSAVAALNQVCERLVSSLASAGVIARRQHGGQIHRWLLRHFNPAPDWGMAKADFY
RTVSYEAPIQSDLPVSNDFAESLWFTPPVSDPDAGVWWFDGLPHKAVLVERLRRPPEPGTLTGEVKRGDNINALMDMMPA
GTVVSLTIVAQAQDRLEEDFTRLTKNAVGENTESLRVRQDVQEVKELLGRRHKLYRSALAFLVRGKDLDDINHRVHQLSS
TLLTAGLQPVRPEFSVSPLNAYLRALPMCFNPQKDKKHGYSRLTWVQHLAGLLPVTGRSTGTGHPGFSFFNRGGAPLTFD
PMNKQDRTQNAHLLLFGPTGAGKSATLCAALIQLMAIHRPRLFIVEAGNSFGLLADYYESLGLTVNKIGIRPGCGVSLAL
FADAHQLLQLSPRQLRINEADIPDTDEQQEDEGDEQRDILGEMEIAARLMITGGEKREEERLTRSDRGLIREAIMMAAQT
SFNEKRQMVASDLQNALYAIARNHRQDEHGQPLITAHRRARADEMASAMSMFTQGFEGELFNRPGTPWPEVDVTLIDLGT
LARENYSAQMALAMVSLINKVNNLAERDQYQDRELQLVIDEGHITTTNPLLSPYMTKVVKMWRKLGAWLWLATQNLADYP
DTAEKMLNMAEWWLCLTMPPDEVEQIARFKKLTEEQKAVLLSASKLPRCYTEGVVLAKKIEALFRVVPPSLYLALGMTEK
EEKAERRALMREHQCSELEAAVLVARKMDIARGLKVDSGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 69
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 67
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 67
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 66
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 66
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 52
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 51
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 50
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 49
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 49
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 49
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 49