Gene Information

Name : fepD (XBJ1_1444)
Accession : YP_003467362.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : ferric enterobactin ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1413710 - 1414756 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGCTGCCCCAATGCATCGTGAGATAACCTCTTCAAAACCCTTGTCTCAATTTCATACTTATCGCACCCGTCGGTT
AACAGGTCCCATAATCTGTTTATTACTCCTCATTATTTTTTCTATAGCGAGTCTGTTATTAGGCAGTAAATATATTGCCC
CTGAGACCGTCTGGCATAGTTTAACCGGTGAGCTGCATAACAATGAGAGCATCATTATTCTCGAATCGCGCCTGCCTCGT
ACCCTTGTCGGTATTTTGGTCGGCATGGCATTAGGTGGTGCGGGGGCATTAATTCAGGCATTGACACGTAACCCTCTGGC
AGACCCGGGTATATTGGGCGTCAACGCAGGAGCCAGCTTTGCCATCGTAGTGGCAATCACATTATTTGGCTTAAGCAGTG
TTATGGCAAAAGTTAGCGTGGCCTGTCTGGGCGCTTTTCTTGCCAGCCTGGCGGTATGGTTAATCAGTATGCAGTCTGGT
GATAAATCCAATCCTGTTCGTTTAACACTGTCAGGAGTCGCGATTAGCGCCCTGTTAACCGGAATAACTACCAATATTGC
CCTGCTCAATCCTTCAACTTTCGATCAATTACGCATCTGGCAGGCGGGTACGCTGGATATCCGATCCTTACAGGTCACTC
TCCTTGTTGCTCCGTTCATTCTTATCGGCTGTGCGCTCACCTTATTGATTTCAAGGCCACTCAATACGTTGAGTATGGGG
GAAGAAATCGCAATAACGTTAGGCGTAAAAATTCTCTGGGTAAAAGTTTCAGCCATCATAGCCATTATGCTGTTATGTGG
AACGGCAACTGCATTGGCTGGCCCGATCGGGTTTGTCGGATTGATGATCCCACATATCGCGCGTTGGTGGTGTGGCCCAG
ACCAACGCTGGATCATTCTGCATTCATTACTCATGGCTCCGGTGTTATTGCTTAGTGCAGATATCGTCGGGCGTTTACTG
GTTGCCGGTGAGTTGCGCGTATCAATCGTCACGGCCTTTATTGGCGCGCCCGTGCTGATCTGGCAGGTACGCAAGCGTAA
ATACTGA

Protein sequence :
MPAAPMHREITSSKPLSQFHTYRTRRLTGPIICLLLLIIFSIASLLLGSKYIAPETVWHSLTGELHNNESIIILESRLPR
TLVGILVGMALGGAGALIQALTRNPLADPGILGVNAGASFAIVVAITLFGLSSVMAKVSVACLGAFLASLAVWLISMQSG
DKSNPVRLTLSGVAISALLTGITTNIALLNPSTFDQLRIWQAGTLDIRSLQVTLLVAPFILIGCALTLLISRPLNTLSMG
EEIAITLGVKILWVKVSAIIAIMLLCGTATALAGPIGFVGLMIPHIARWWCGPDQRWIILHSLLMAPVLLLSADIVGRLL
VAGELRVSIVTAFIGAPVLIWQVRKRKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-35 47
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-35 47
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-35 47
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_003467362.1 ferric enterobactin ABC transporter VFG0926 Protein 5e-60 54