Gene Information

Name : XBJ1_1425 (XBJ1_1425)
Accession : YP_003467343.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1387094 - 1388011 bp
Length : 918 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGGCGCAGGGATCGACACGTTCAAAGGTTGAGCAGTTCAGAAAAGCCTTTATCACGCATGCCCGACAGGCGGGCGGAAG
TTTTGTTACGGTGGCGGATCGTGAGCGTATGGCCCGGCAGTTCCTTGATTATTTGAAAAACAATGGCATCAAACTCCGGC
AAATGGATAGCCTGAAGGTGAAATATATTGAGCGCTATATGGCTGAGCGCAAAGCCAACAATCTCAGTCACCGGACACTG
CAAAATGAAATGTCGGTGCTGCGAGCCATTTTAGCGCAGGCGGGAAAGCATAAGCTGGTTGATCCCGATAATGCTCGCCT
GAGTAACCGGGCATTGGGTATCGCGGATACCAGCCGCAAGGGAACTAAAATGGCGCTGGCACCGGCTGCGTTCCGGGACA
TTTTTCAACAGGTGGAGCAAAAAGACCGGAGTGTCGCGGCTGTGATGCAACTGGAGTATGTGCTGGGACTGCGTACCAAA
GAAGCGGTGGAAGCCTACAAATCGTTAGCGACCTGGAAGAAAGCACTGGAAAACGGGCATACGTCTGTGCGGGTGGTGTT
CGGTACTAAAGGTGGACGGTCTCGACAGACGACCATATTGGATCGGGCAGCGCTGCAACATGCCATTGCCTATGCGGAGC
AAGAGCAGGCAGGACATAGCGGCAAACTGATTGATAAGCCGACGATCACTCAGGCCATAGACCGTTACCGCTATATTGTC
AGACGTGCAGGACTGAGCGGCAATAAAGCGCCACACAGTATGCGTTATCATTTTGCTCAGCAATCCGGAGAGCATTATAT
AGCGCAAGGATTCAGTGAGCGGGAAGCGCTGGCACTGGTCTCGATGGATTTAGGACATGGTGACGGGCGAGGACGTTATA
TTCGGCAGGTGTATTACCAGAATATTGAGGGTGAATAA

Protein sequence :
MAQGSTRSKVEQFRKAFITHARQAGGSFVTVADRERMARQFLDYLKNNGIKLRQMDSLKVKYIERYMAERKANNLSHRTL
QNEMSVLRAILAQAGKHKLVDPDNARLSNRALGIADTSRKGTKMALAPAAFRDIFQQVEQKDRSVAAVMQLEYVLGLRTK
EAVEAYKSLATWKKALENGHTSVRVVFGTKGGRSRQTTILDRAALQHAIAYAEQEQAGHSGKLIDKPTITQAIDRYRYIV
RRAGLSGNKAPHSMRYHFAQQSGEHYIAQGFSEREALALVSMDLGHGDGRGRYIRQVYYQNIEGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 3e-87 58
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 3e-87 58
api85 CAF28559.1 putative integrase Not tested YAPI Protein 1e-49 49
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 5e-66 48
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 2e-63 48
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 3e-52 48
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 3e-52 48
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 2e-56 48
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 2e-56 48
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 7e-56 47