Gene Information

Name : alpA (XBJ1_1317)
Accession : YP_003467237.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1298764 - 1298970 bp
Length : 207 bp
Strand : +
Note : -

DNA sequence :
ATGACAATGACAGCACCGAAAGAAAATCTTATTCGTTTGCCCGAAGTTCAGCGCAGAACGGGTTATAGCAAGGCGTGGAT
CTACAAACTGATTAGTGATGGAGAATTCCCGAAACAAATCAAACTCGGCTCCCGTTCCATCGCGTTTATTGAATCAGAGA
TTGATAACTGGATTGCGCAGCGGATCGCAGGATCACGAGCGGCATAG

Protein sequence :
MTMTAPKENLIRLPEVQRRTGYSKAWIYKLISDGEFPKQIKLGSRSIAFIESEIDNWIAQRIAGSRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 3e-08 47
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-08 47
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 2e-05 45
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 2e-05 45
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 44
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 44
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 44
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 1e-05 42
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 9e-08 42
unnamed CAA21398.1 - Not tested HPI Protein 1e-07 42
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 2e-07 42
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 3e-07 42
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alpA YP_003467237.1 CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage VFG1480 Protein 1e-08 47
alpA YP_003467237.1 CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage VFG1118 Protein 4e-07 44
alpA YP_003467237.1 CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage VFG1141 Protein 8e-11 41