Gene Information

Name : XBJ1_1308 (XBJ1_1308)
Accession : YP_003467228.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : protein VgrG
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 1291415 - 1293601 bp
Length : 2187 bp
Strand : -
Note : -

DNA sequence :
ATGTCAATAAAGAAGAACCTCGATAAATTGAAGAAAGGGCAAGCCCTTGTTCAGCAGGGGCAAGAGGCTGTTCAGAAAGC
GAAACAAGTTGCAGGCAAATTGGGCAGCGGCATGTCAGGAACAGCAGGTTTAATCCCGGGTGGTGGTTTTGCCGGCGGAA
TAGGCGGCCGTTCAGGCAGCGGCATGACAAGCACCGCGGGCTTAATCCCGGGTGGCGGTTTTACCGGTGGGCAGGGGCTG
GCAGAACGCTCAGCCGGGGGACAGAATGCCGCCACCAAAGCACTGGAAAAAGTCGGCCAGATGCTGATGGGCGGGCGTGA
CCCGAGTGGCCTGCAATTTACCCTGACCGCAGGCAGCTTACCGCCACAGACGTTTGTGGTGACCGATTTCACCCTGAACG
AAAGTTTTTCCCAGCCGTTCAGCCTGAGTGTGGGACTGGCGAGTGCCGACCCGGTTATTGACTTTCCGGCCGTACTGGAT
CGCACCGCCACGCTGACCATTCTGCAAAACGGTATCGAACAACGCAGCATCACGGGGATCGTTTCCCGCTTTGAGCAGGG
TAACACCGGGTTGCACCAGACCACCTACCAGATGACTATCCGGCCGGATCTGTGGCGCACGACCCTGAGACAGAACTCAC
GTATTTTCCAGCAGCAGGATATCGCCACCATCATCACCGCCCTCCTGAAAGAACACAGCATCCGCGATGTGATCTTCAGC
CTGCGCCATCCTCATCCCGCGCGCGAATTCTGCGTGCAGTATCAGGAAAGTGACTTTGCCTTCCTGCAACGGTTAACCGC
GGAAGAGGGTATTTTCTACTTCTTCGAATGCAGTAACGGGCGCAACACGCTGGTCTTTGCCGATGACTGTGGTTCTGTGC
CGCCGGGCATAGTCATCCCTTATCAGCCCGGTGAAGTCAACACCGTGGGTGAACCTGCCATCAGCAGCCTGACATGCAGC
GCACAAGTACGGCCGGCTCAGGTACAGCTTAAGGATTACACTTTCAAGAACCCGGCATGGCCGGCGGAATTTCACCAGCA
GATGCGGGATGAAAATCTGCAACAACTGTACTACGAGCACTACGACTACCCCGGCCGCTTCAAAGACGAGGCGCATGGCA
AGGATTTTACCCGCTACCGGCTGGAGGCGCTGCGCAGCGACGCAGTGACCGGACAGGGCAGCGGCAATGCGATAGCGCTA
CAGCCGGGTAAACTGTTTATCCTGAATAATCATCCACGGATAGACCTGAACCAGTCATGGCAGACCATCTCCACCAGCCA
CAGCGGCAGCCAGCCGGGTGCACTGGAGACAGCAACCGACGGCGCAGGCACCACGCTGCACAGCCACTTCTATTTCATCC
GCCAGAATCAGAACTGGCGCCCGGCACCGCTGTCCAAACCGGTGGTTGATGGCCCACAAATCGCTAAGGTGGTCGGCCCG
GCCGGCGAAGAAATCTTCTGTGACCAATATGGACGGGTACGTCTGCAATTCCCGTGGGATCGCTATGGCAAATCCAACGA
CCAGAGTTCCTGCTGGATACGGGTGAGCCAGCCGTGGGCGGGCCAAGGCTGGGGCATCCTGGCCATCCCACGTATCGGAC
AGGAAGTGGTGGTGGATTTCCTGCACGGCGACCCCGACCAGCCGATAGTGACCGGGCGGACTTACCATGCCAGCAACATC
CCGCCGGGGGCCTTGCCGGGCAGCAAAACCCAGATGGCGTTCCGCTCCAAAACTCACAAGGGACAGGGCTACAACGAACT
GCTGTTTGAGGATGCCAAGGGCAGCGAACTGCTGTCACTGCACGCGCAGAAAGACATGTACACCAAGGTGCTCAATAACC
GGGATACCCATGTGCTCGCCAACCACAGCGAAACCGTGGAGAAAAACCAGACCATCACGGTCAATGAGAACAAAGAAGAA
ACGGTTACGCTCAACAGCACGGAAACCGTGAAAGAAGTGCGCAAACTGATCACTGGCAAGGACTACATTATCGAGGTCGG
TACCCACAAGATAGAAACCATCAACAATACCCTTTCCATCACAACTGGCGATGTGATCGAGCTACGCTGCGGAGCAAGTG
TGTTACGTATGGACAGTGCCGGACGTATCACCCTTCAGGGCAGTGAGTTTAAGTTTGAGGCCAGCGGCCCGGTGCAAATC
ACGGGTAAAGACATCGACCTGAACTAA

Protein sequence :
MSIKKNLDKLKKGQALVQQGQEAVQKAKQVAGKLGSGMSGTAGLIPGGGFAGGIGGRSGSGMTSTAGLIPGGGFTGGQGL
AERSAGGQNAATKALEKVGQMLMGGRDPSGLQFTLTAGSLPPQTFVVTDFTLNESFSQPFSLSVGLASADPVIDFPAVLD
RTATLTILQNGIEQRSITGIVSRFEQGNTGLHQTTYQMTIRPDLWRTTLRQNSRIFQQQDIATIITALLKEHSIRDVIFS
LRHPHPAREFCVQYQESDFAFLQRLTAEEGIFYFFECSNGRNTLVFADDCGSVPPGIVIPYQPGEVNTVGEPAISSLTCS
AQVRPAQVQLKDYTFKNPAWPAEFHQQMRDENLQQLYYEHYDYPGRFKDEAHGKDFTRYRLEALRSDAVTGQGSGNAIAL
QPGKLFILNNHPRIDLNQSWQTISTSHSGSQPGALETATDGAGTTLHSHFYFIRQNQNWRPAPLSKPVVDGPQIAKVVGP
AGEEIFCDQYGRVRLQFPWDRYGKSNDQSSCWIRVSQPWAGQGWGILAIPRIGQEVVVDFLHGDPDQPIVTGRTYHASNI
PPGALPGSKTQMAFRSKTHKGQGYNELLFEDAKGSELLSLHAQKDMYTKVLNNRDTHVLANHSETVEKNQTITVNENKEE
TVTLNSTETVKEVRKLITGKDYIIEVGTHKIETINNTLSITTGDVIELRCGASVLRMDSAGRITLQGSEFKFEASGPVQI
TGKDIDLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 0.0 63
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-135 47
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 3e-135 47