Gene Information

Name : XBJ1_0111 (XBJ1_0111)
Accession : YP_003466062.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : 2.3.1.28
Position : 116534 - 117160 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAAACTACTTTGACAGCCCATTTAAGGGCAAAACCTTAGCGGAACAAGTCACTAATCCGAATATTCAGATCGGCCG
TTTCAGTTACTATTCCGGTTATTATCATGGTCACTCTTTTGATGACTGCGCCCGTTACCTGCATCCCGATCTGGTTGATG
TTGATAAGTTGATCATCGGCAGCTTCTGCTCCATCGGCACTGGAGTCGCCTTTATGATGGCAGGTAATCAAGGACATCGT
TTGGATTGGGTTTCATCCTTTCCGTTTTTCTATATGTCGGAAGAACCGGCCTTTGCTGATGCTCAAAATGGCTACCAACC
GATGGGAGATACTGTTATCGGCAATGACGTCTGGATGGGTGCCGAAGCGATTATTATGCCCGGCGTAAACATTGGCGATG
GGGCAGTTATCGGCACCCGCGCTCTTGTCACCAAGGATGTGGAACCTTACACCATTATTGGTGGCAATCCGGCGAAGGTG
ATCAGAAAACGCTTTTCAGATGAACAGATTGCTATGTTACTGGAAATGCAGTGGTGGAACTGGCCGCTGGAACAATTAAA
AGCGGCGATGAAGATGCTCACTTCAGCAGATATTGAAGGGTTATATCGGTGGTGGCAGAATCAGTAG

Protein sequence : 
MENYFDSPFKGKTLAEQVTNPNIQIGRFSYYSGYYHGHSFDDCARYLHPDLVDVDKLIIGSFCSIGTGVAFMMAGNQGHR
LDWVSSFPFFYMSEEPAFADAQNGYQPMGDTVIGNDVWMGAEAIIMPGVNIGDGAVIGTRALVTKDVEPYTIIGGNPAKV
IRKRFSDEQIAMLLEMQWWNWPLEQLKAAMKMLTSADIEGLYRWWQNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-67 74
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-67 74
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-67 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 7e-68 74
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 7e-68 74
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 2e-67 72
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 2e-66 70
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 2e-60 68
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 1e-33 47
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 6e-40 45
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 6e-27 45
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 6e-27 45
XBJ1_0111 YP_003466062.1 chloramphenicol acetyltransferase NC_011586.7045146.p0 Protein 3e-27 45