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Name : pdhD (lse_0949) Accession : YP_003464188.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase E3 subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 992123 - 993526 bp Length : 1404 bp Strand : + Note : - DNA sequence : ATGGTAGTAGGCGATTTTCCAGAAGAAAGAGACACCATAGTCATCGGTGCAGGCCCAGGTGGGTATGTAGCCGCAATTCG AGCAGCACAACTCGGACAAAAAGTTACCATTATTGAAAAAGAATATTACGGCGGTGTTTGTTTGAACGTTGGATGTATTC CTTCTAAAGCACTTATCACTGTTGGTCACCGTTTTAAAGAAGCGAACCACTCTGATAACATGGGAATCACAGCTGATAAC GTAAGCTTAGATTTCACTAAAGCACAAGAATGGAAAGGAAGCGTCGTTAACAAGCTTACATCAGGAGTTAAAGGCCTTCT TAAGAAAAATAAAGTAGAAATGTTAGAAGGAGAAGCGTTCTTCGTGGATGATCATTCTTTACGTGTGATTCACCCTGATT CCGCTCAAACTTATACATTCAATAACGTTATCATTGCAACAGGATCTCGTCCAATCGAAATCCCTGGTTTCAAATATGGT AAACGTGTATTAAGTTCTACTGGCGCGCTTGCATTAACAGAAGTTCCGAAAAAATTAGTCGTTATTGGCGGCGGATATAT CGGAACAGAATTAGGTGGAGCGTTCGCTAACCTTGGAACAGAACTTACCATCCTTGAAGGCGGCCCAGAAATCTTACCAA CTTACGAAAAAGATATGGTTTCGCTTGTAAAACGTAATCTGAAAAGCAAAAACGTTGAAATGGTTACTAAAGCACTTGCA AAATCCGCTGAAGAAACCGAAAATGGCGTAAAAGTAACTTATGAAGCAAATGGTGAAACAAAAACTATCGAAGCTGACTA CGTGTTAGTAACAGTAGGTCGTCGTCCAAATACAGACGAAATTGGTTTAGAACAAGCTGGCGTAAAAGTAACTGAACGTG GCTTAGTAGAAGTAGACAAACAAGGTCGCTCTAACATTCCAAACATTTTTGCAATTGGTGATATCGTTCCTGGTGTCCCA CTTGCGCATAAAGCAAGCTACGAAGCAAAAATTGCTGCTGAAGCAATCGCTGGTGAAAATGCAGAAAACGACTATACAGC ACTTCCAGCTGTCGTATTCAGTGATCCAGAACTTGCAACAGTTGGTTTGACTGAAAAAGAAGCAAAAGAAAAAGGCTTTG ATGTAAAAGCTGCTAAATTCCCATTCGGTGGTAACGGTCGTGCACTTTCTTTAGATGCACCTGAAGGATTTGTTCGTCTA GTTACTCGTAAAGAAGATGGCCTAGTTATCGGTGCGCAAGTTGCCGGAATGAACGCTTCTGATATTATTTCAGAAATCGG CTTAGCAATCGAATCAGGCATTACTGCAGAAGACATCGCGCTTACCATTCATGCTCACCCTTCACTTGGAGAGTTAACAA TGGAAGCTGCCGAACTTGCTTTAGGTCGCCCAATTCACATGTGA Protein sequence : MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITVGHRFKEANHSDNMGITADN VSLDFTKAQEWKGSVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYG KRVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALA KSAEETENGVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNIPNIFAIGDIVPGVP LAHKASYEAKIAAEAIAGENAENDYTALPAVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLDAPEGFVRL VTRKEDGLVIGAQVAGMNASDIISEIGLAIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-96 | 49 |
