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Name : clpE (lse_0898) Accession : YP_003464137.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 942880 - 945048 bp Length : 2169 bp Strand : - Note : - DNA sequence : ATGAATTGTGAAAAATGTAATCAAAATCCAGCAACAATCCAATTATATATGAATATTAACGGCAAACATGTCGAAATGCC ACTTTGCGCATCTTGTTATGCCGAAGTTAGAAATCAAGCAAACTTTGGAGCAAATGAATTTCCAGCAGGTGGCGGTTCTC CGTTCGATGATATTTTCCGTCAATTAAGTAGTGCTGCAAACCAACCAAATCGCGAACAAAGAAGTCAAGCACAAGTCCAA ACCCAAGCTGGGGATGGTGGCAGCGGTTTACTTGATGAATTTGGTACCAATTTAACAGATATGGCAAAAAACAACCAACT AGATCCAGTAATTGGTCGTGATAAAGAAATTAAACGAGTGATTGAAATATTGAATCGCCGTAATAAAAATAATCCGGTGC TAATCGGTGAACCCGGCGTTGGTAAAACAGCTGTTGTTGAAGGACTTGCAAACGCAATTATCGCAGGAAATGTCCCAACA AAACTACTAAACAAAGAAGTTATTTTACTCGATGTCGCTTCTCTTGTTTCAGGAACGGGTATCCGTGGTCAATTTGAAGA ACGAATGAAACAATTAATTAAAGAACTTCAAGACCGTAAAAACACGATTTTATTTATTGATGAAGTGCATACAATTGTTG GTGCGGGATCTGCGGAAGGTTCGATGGATGCAGGTAATATTTTAAAACCAGCACTTGCTCGTGGCGACTTACAAATGATT GGAGCGACTACACTCAAAGAATACCGCACTATCGAAAAAGATGCTGCACTTGAACGCCGCTTCCAACCTGTAACCGTAAA TGAACCTTCTATTGAAGAAACTCTAACCATTTTAAATGGCTTAAAAGATAAATATGAAGAATTCCATGAAGTTGTTTACT CCCCTGAAGCATTAAAAGCAGCGGTAGAATTAAGTACTCGTTACATTCAAGATCGTCATTTGCCCGACAAAGCAATTGAT TTAATGGATGAAGTTGGTTCTAAATACAACTTATCCATTGAAAAACTAGATGAAAACACCGTCAGTGAACGTGTCGCTCG ATTAGAAGAAGAAAAAAACCAAGCACTTCAAATGGAAGATTATGAAAAAGCTGCTAAAGTTCGCGATGAAATTTCTCGCT TAGAAGAAAACAAAACAAATAATTCATTCTCAGAACGCCCTGTTATTCAAGCTTCTGACATCCAAGCAATTATTGAGGAA AAGACAGGGATTCCAGTCGGACGTTTACAAGAAAATGAACAATCAAAAATGAAACATCTAGAAAGTAATTTGTCTGGAAA AGTAATCGGTCAAGAAGATGCAGTGAAAAAAGTAGCCAAAGCGATTCGTCGTAGTCGAGTTGGTTTGAAAGCTAAAAATC GTCCAATCGGTTCCTTCCTATTTGTTGGACCAACCGGGGTCGGAAAAACAGAACTTGGTCGGACGCTCGCTCGTGAATTA TTCGGTACTAGTGAAGCGATGATTCGCTTAGACATGAGTGAATTCATGGAAAAACACAGTGTCTCTAAATTAATTGGTTC TCCTCCAGGCTATGTTGGTCATGAAGAAGCTGGACAATTAACTGAAAAAGTTCGTCGCAACCCATATAGCATCATTCTTT TAGACGAAATTGAAAAAGCGCATCCAGACGTTCAACATATGTTCCTACAAATTTTGGAAGATGGTCGTTTAACAGACTCT CAAGGTCGTACAGTAAGCTTTAAAGATACAGTCATCATTATGACAAGTAACGCTGGCACAACTGATACAGAGGCTTCTGT TGGCTTTAACACCACTGCTGACGCTAAACTAGAAAAAGGTTCTGACATTCTGGCAAAACTAGGTGCATACTTTAAACCAG AATTCCTAAACCGTCTAGATAGCGTTATCGAATTTAAATCACTTGAAAAAGATGACTTAGTTCACATCATCGACTTAATG CTTGTTGATTTAAATACGATGCTAGCTCAAGAAGAAGTTACTATTGATGTGTCACCTGAAGTCAAAGAACATATGATTGA GCTTGGATATGACCCTAAATTTGGTGCTAGGCCACTTCGCCGGACAATCCAAGAACATTTAGAAGATGCGATTGCTGATA CTCTAATCAATCAACCAGAAGCAAAACATTTAGTCGCAACATTGAATGACGAAAAAGAAATCGTCATCAAAGAACAGGTA ACTGCATAA Protein sequence : MNCEKCNQNPATIQLYMNINGKHVEMPLCASCYAEVRNQANFGANEFPAGGGSPFDDIFRQLSSAANQPNREQRSQAQVQ TQAGDGGSGLLDEFGTNLTDMAKNNQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIIAGNVPT KLLNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQDRKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQMI GATTLKEYRTIEKDAALERRFQPVTVNEPSIEETLTILNGLKDKYEEFHEVVYSPEALKAAVELSTRYIQDRHLPDKAID LMDEVGSKYNLSIEKLDENTVSERVARLEEEKNQALQMEDYEKAAKVRDEISRLEENKTNNSFSERPVIQASDIQAIIEE KTGIPVGRLQENEQSKMKHLESNLSGKVIGQEDAVKKVAKAIRRSRVGLKAKNRPIGSFLFVGPTGVGKTELGRTLAREL FGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDS QGRTVSFKDTVIIMTSNAGTTDTEASVGFNTTADAKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVHIIDLM LVDLNTMLAQEEVTIDVSPEVKEHMIELGYDPKFGARPLRRTIQEHLEDAIADTLINQPEAKHLVATLNDEKEIVIKEQV TA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-156 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_003464137.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 0.0 | 93 |
| clpE | YP_003464137.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 3e-161 | 52 |
