Gene Information

Name : lse_0712 (lse_0712)
Accession : YP_003463951.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 754941 - 755609 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence :

ATGACATTAATCATGAAAAATATTTCTAAAAGTTATCAAGACGGCGAACAACAGATTGAGGTTTTAAAAAATGTTTCTCT
AGAAGTAGCTCAAGGTGAATTCGTGGCAATTCTTGGTCCATCTGGAGCTGGGAAAAGTACTTTCTTATCTATCGCGGGAG
CTTTACTTTCACCTACAACCGGAGAAATATTGATAGGTGGAAAAGGATTGAGCAACCTATCAAATAAAGAATTAACAAAA
GTACGGCTAGATAAAGTCGGGTTTATTTTTCAAGGGGCGAACCTGATTCCTTATTTGAATGTTCGTGACCAACTTTTACT
AATCGCTGAACTAGCTGGGCAGAAAGGTTCTAAAGCAAAAGAGAAGGCGGCTACATTACTCAAAGAACTAGGTCTCGAAG
CGCGCCAAAACAATTATCCAGAAAGCTTATCTGGTGGTGAAAAACAACGCGTGGCAATTGCTAGATCACTAATGAATGAT
CCAGATATTATTTTGGCGGATGAACCTACCGCAAGCCTAGATGCAGATCGCGGCCATAAAGTAGTGCAAATGATTGCAGA
TGAAGTGAAAAAGAAGAATAAAGCAGCGATTATGGTTACTCATGATGAACGAGTATTAGACTTGGTTGATCGGGTAATTA
GGATAGAAGATGGTTATTTAAAAGAATAG

Protein sequence :

MTLIMKNISKSYQDGEQQIEVLKNVSLEVAQGEFVAILGPSGAGKSTFLSIAGALLSPTTGEILIGGKGLSNLSNKELTK
VRLDKVGFIFQGANLIPYLNVRDQLLLIAELAGQKGSKAKEKAATLLKELGLEARQNNYPESLSGGEKQRVAIARSLMND
PDIILADEPTASLDADRGHKVVQMIADEVKKKNKAAIMVTHDERVLDLVDRVIRIEDGYLKE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	3e-38	45
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	5e-43	44

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
lse_0712	YP_003463951.1	ABC transporter ATP-binding protein	NC_012469.1.7686878.	Protein	2e-38	46
lse_0712	YP_003463951.1	ABC transporter ATP-binding protein	CP001581.1.gene598.p	Protein	6e-33	43
lse_0712	YP_003463951.1	ABC transporter ATP-binding protein	CP001581.1.gene798.p	Protein	1e-34	42