Gene Information

Name : fliI (lse_0627)
Accession : YP_003463866.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 655944 - 657245 bp
Length : 1302 bp
Strand : +
Note : -

DNA sequence :
GTGAATTGGTCGCCTAAAAACCAAGCCTGGCAGGAACTGAAAAACACCGTTCCTTACATCCAAAAAGGCAAAATCCACAC
CGTCCAAGAACAAATGTATATTTCCAAAGGCCCACAAGTGAAAATTGGCGACACAGTCATGGTCGGCGAAAATAAAGTCC
TTTGCGAAGTTATTTCCATCGAAAAAGAAAACAATATGCTATTACCTTTTAATCAAAGTGATAAAGTAGCATATGGTGAC
TGGGTTTACGTAACAGATACAAAAATCACCATCCCCGCGGACGAATTTTTACTTGGAAAAGTTTTAAATGCCTCAGGAGA
AATCTTAAATGAAGAAGCAGGTACAGCAAAATTCAAGCAAAAAATGCCACTTGAAGCACCACCAATCCATGCTTTTAACC
GGGCAGAAATCACTGAAACACTCGAAACAGGTATTAAAGCAATTGACGGCATGTTAACGATTGGAATTGGTCAAAAAATC
GGTATTTTCGCAGGCTCTGGGGTGGGGAAATCGACCTTACTAGGAATGATTGCTAGAAATGCCAAAGCAGATATCAACAT
TATTGGCTTAGTTGGTGAACGTGGTCGGGAAGTAAAAGATTTCTTACGGAAAGACCTAGGCGAAGAAGGACTGCGAAAAA
GTGTGATTGTTGCTGCTACTTCTGATGAAAGCCACCTAATGCAACTACGCGCGGCAAAACTTGCCACATCAATTGCCGAA
CACTTCCGCGACCAAGGAAAAACCGTTCTGTTGATGATGGATTCCGTGACGCGATTTGCAGATGCAAGAAGAAGTGTGGA
TATCGCAGTAAAAGAACTACCAATTGGCGGGAAAACATTGCTAATGGAGTCTTATATGAAGAAATTACTAGAACGTTCTG
GGAAAACAAAGCTTGGTTCAATAACAGGGATTTATACAGTGCTCGTAGACGGAGACGATATGAATGGACCTGTACCCGAT
TTAGCACGAGGGATTTTAGACGGACATATTGTTTTAACCAGAGAATTAGCTACAAAAAATCATTATCCAGCAATTGATGT
TCTTGGTTCCGTTAGCCGGGTAATGGAAGAAATCGTCCCAGAAAACCAGTGGGAAAATGCTTCGAAAATCCGCGAATGGA
TGAGTATTTATCAAGAAAATGAACTTTATTTTAAACTAGGAACGATTGAACAAACGAACGATAATGCTTCTATTTTTACA
AGTAAAGAAAAATCCTATTTTATCCATCAATTTTTAAAACAGTTGCGTGACGAAAATGTCTCGCTAGAAGAAACGAACCA
ATTGATGGAAACTTTAGTATAA

Protein sequence :
MNWSPKNQAWQELKNTVPYIQKGKIHTVQEQMYISKGPQVKIGDTVMVGENKVLCEVISIEKENNMLLPFNQSDKVAYGD
WVYVTDTKITIPADEFLLGKVLNASGEILNEEAGTAKFKQKMPLEAPPIHAFNRAEITETLETGIKAIDGMLTIGIGQKI
GIFAGSGVGKSTLLGMIARNAKADINIIGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAE
HFRDQGKTVLLMMDSVTRFADARRSVDIAVKELPIGGKTLLMESYMKKLLERSGKTKLGSITGIYTVLVDGDDMNGPVPD
LARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQWENASKIREWMSIYQENELYFKLGTIEQTNDNASIFT
SKEKSYFIHQFLKQLRDENVSLEETNQLMETLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-67 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-67 46
unnamed AAL06369.1 EscN Virulence LEE Protein 8e-66 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-67 42
escN CAC81862.1 EscN protein Virulence LEE II Protein 9e-67 42
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-67 42
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-66 42
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 9e-68 42
escN AAK26715.1 EscN Virulence LEE Protein 1e-66 42
escN AAL57542.1 EscN Virulence LEE Protein 1e-66 42
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-67 42
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-67 42
escN AAC38383.1 EscN Virulence LEE Protein 2e-67 42
escN YP_003236088.1 translocator EscN Virulence LEE Protein 8e-68 42
escN AAC31513.1 L0034 Virulence LEE Protein 9e-68 42
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-65 42
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-67 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-64 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_003463866.1 flagellum-specific ATP synthase FliI VFG2144 Protein 5e-72 45
fliI YP_003463866.1 flagellum-specific ATP synthase FliI VFG0048 Protein 8e-70 43
fliI YP_003463866.1 flagellum-specific ATP synthase FliI VFG0192 Protein 2e-69 42
fliI YP_003463866.1 flagellum-specific ATP synthase FliI VFG0812 Protein 5e-68 42
fliI YP_003463866.1 flagellum-specific ATP synthase FliI VFG0730 Protein 1e-67 42
fliI YP_003463866.1 flagellum-specific ATP synthase FliI VFG0390 Protein 7e-63 42
fliI YP_003463866.1 flagellum-specific ATP synthase FliI VFG1254 Protein 4e-69 42