|
Name : xylA (lse_0485) Accession : YP_003463724.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 513564 - 514877 bp Length : 1314 bp Strand : + Note : - DNA sequence : ATGAGTTATTTTCCACAAGTAGAAAAAATTCAGTATGAAGGTAAGAACACAAAAAATCGGTTGGCTTTTCGTCATTATAA TGCAGAAGAAGTTGTTTTAGGAAAACCAATGAAAGAACATTTGCGTTTTGGAGTCGCATATTGGCATACGATGACACAAG ATGGTAGTGATCCATTCGGAATGGCAATTAATGAGCGGACTTGGATTGCGGGAACGGAGATGGAAACCGCGAAGAATCGT GTCGAAGCATTCTTTGAAATCCTTGAAAAATTAGGCGCAGAATATTTTTGTTTCCACGATATTGACGTAGCTCCGGCTGG CAATTCGATTGAAGAATTTATGAACAATTTGGACGAAATTACAGATTTAATTAAAGAAAAAATGGACCAAACAGGGATTA AATTACTTTGGAACACTGCTAATATGTTTTCACATCCACGTTTTAACAATGGAGCAGGTTCGACAAATGACCCAGAAGTT TTCGCCTATGCAGCTGCGCAAGTGAAAAAAGGACTTGATATTTCAAAAAAACTAAATGGCGCCAACTACGTATTTTGGGG TGGCCGTGAAGGTTATGAAACGCTATTAAATACTGATATGAAGTTTGAGCAAGATAATATTGCGCGCTTATTCAAAATGG TTATCGCTTATGCAGGAAAAATTGGTCATAAACCACAGTTCTTAATTGAACCAAAACCAAAAGAACCTTCCAAACATCAA TATGATTTTGATGCAGCAACAACCATGGCATTTATTCAAAATTATGGTTTAGAGGGCGACTTTAAGTTAAACTTAGAAGC AAACCATGCGACACTTGCTGGTCATACATTTGAACATGAACTGCGTGTAGCACGCGAATTTAATGCGCTTGGTTCGATTG ATGCTAACCAAGGGGATATGTTGCTTGGTTGGGATACAGATGAGTTTCCAACGAATGTAGTTGATGTGACTCTAACAATG TATGAAATTTTACAAAATGGTGGAATCGCGCCAGGTGGTATTAATTTTGATGCAAAAGTGAGACGTTCTTCCTTTGCAAT GGAAGACTTGCTACTTGCGCATATTGCCGGAATGGATACGTTTGCGCGTGGACTAAAAGCAGCAGCAAAAATAATTGAAG ACAAATTTATCGAAAATATCCTTAATGAACGTTATGGTAAATGGTCAAGTACTGATATTGGTAAATCCATTTTAGATGGA AAAGAAGATTTAGAGTCACTTACAAAATATGCGTATCAACATGGCGATAATATTAAATTGGAATCAAGCCATATCGAACA TGTGAAATCAGTCTTGAATGATTATGTCTTTTAA Protein sequence : MSYFPQVEKIQYEGKNTKNRLAFRHYNAEEVVLGKPMKEHLRFGVAYWHTMTQDGSDPFGMAINERTWIAGTEMETAKNR VEAFFEILEKLGAEYFCFHDIDVAPAGNSIEEFMNNLDEITDLIKEKMDQTGIKLLWNTANMFSHPRFNNGAGSTNDPEV FAYAAAQVKKGLDISKKLNGANYVFWGGREGYETLLNTDMKFEQDNIARLFKMVIAYAGKIGHKPQFLIEPKPKEPSKHQ YDFDAATTMAFIQNYGLEGDFKLNLEANHATLAGHTFEHELRVAREFNALGSIDANQGDMLLGWDTDEFPTNVVDVTLTM YEILQNGGIAPGGINFDAKVRRSSFAMEDLLLAHIAGMDTFARGLKAAAKIIEDKFIENILNERYGKWSSTDIGKSILDG KEDLESLTKYAYQHGDNIKLESSHIEHVKSVLNDYVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-165 | 77 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-165 | 77 |
