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Name : lse_2606 (lse_2606) Accession : YP_003465839.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG4886 EC number : - Position : 2675786 - 2677588 bp Length : 1803 bp Strand : - Note : - DNA sequence : GTGATAAAAAAACGACACTCATTTTTTAGTTTTTTAGCAGCATTATTGATAGTTGGAAGTATTAACTTATGGGTAGGCAC AAGTCATGAGATGGTGGTGCAGGCAGATAGCATTGATCAACCGACACCAATCAATCAAATTTTTCCAGATAGTGCTTTAG CAGAAGTAATGAGATACCAGCTAGGAAAGTCTTCAGTAACAGATGTTGTTTCACAGAGCGAGTTGGATAATGTAACAAGT GTTAACGGACAGAAAAAAGAAATAATATCTATAGAAGGGGTCCAATATTTAACGAATTTGACAAATCTCCTTTTAGCGGA AAACAACATAAGAGATATCCAACCATTAGAAAATTTAACCAACTTAACTGTTCTTAATATGATAGATAATGAGTTAACTG ATATCTCACCTTTGTCCAATTTAACTAATCTGACGAAGTTGTCTTTGGGAGATGATTCAATTATTGATGTTAGCCCATTA GCTGGTTTAACCAATTTAATCAACCTGTATTTGACTTCTTATGATTTAACGGATGTAAGTGAGCTAGCCAATTTAACTAA TCTAACGAATCTCTGGCTTTCTTCGCCTAAGCTAAGTAATGTCAGCGTATTATCAAATTTCCACAATTTAGAAACGTTGC AGTTGCGTAGTACTTTAGTAAGTGATATTACCCCGATAGCCAACTTAAAAAAGCTGAAGTTATTAGATGTGAGTATGAAT GAAATAAAGGATATAAGTTCTTTATCGGAGTTATCTAATTTAACAGAGCTAACTTTGACTGATAACCATATAAGTGATAT TAGTGCATTATCTGAATTAACTAACTTAAATTATCTATATTTGGACGTCAATCAAATAAGTGATATTAGTGCATTAGCTG ATTTAAGTAATTTAGAAGAATTATACGTTATGGATCAAACTATAACTAATGAACCACTGACCTTTCAGACCAATATAGTT ATTAATAATACGATAAAAGACGAAAATGGTGCATTAGTAACCCCGCTGGATATAAGTGATAATGGAAGTTATACTAGTCC AAATATCACCTGGAATCTACCAGCCTATACGGATGAAGTAAACTACACGTTTGAAAAAATTGGAAGTATCGGAAATGGTC CATTCTATTTCACTGGGACAGTTTACCAACCTCTAGAAGAAGTACCAGCAACTTACAATGTAATTTTCGATATAGATGGT GTGCAAAATAGTGAAGAAGTTGTAGTAGACGCGTTACTTGAAGAGCCAGCCGCACCAACCAAAGAAGGCTACACGTTCAC AGGTTGGTATGATGCAAAAACAGGCGGGGAAAAATGGGACTTTACCACGGATAAAATGCCAGCAAAAGATATCACGCTAT ATGCCCAATTTAGCATAAATAACTACAAAGCTATATTTGATGTAGATGGCACAACAACGAGTCAAACAGTAAATTATCAA AGCTTATTGACCAAACCAACAGACCCAACCAAAGAAGGCTACACATTCACAGGTTGGTATGACGCAAAAACAGGCGGGAA TAAATGGGACTTTACCACGGATAAAATGCCTGCGAACGATATCACATTATACGCCCAGTTCAGTAAAAATCCAGAAAATG GTGGGACAGACACACCTAGTAATGGTAATAAAACTAAGCCCGAGCAACCAGCAAGGGAAAATAGTACGACCATAACTGCT ATAGAAAAAAGTACAACGCTCCCCAAGACAGGTGACAACGGAACCGCTCTTTTAGTACTAGCAGGTTTATTATTAACAGG AGCATCATTATTACTCACCAAACAGAAGAAAAAATCGATATAA Protein sequence : MIKKRHSFFSFLAALLIVGSINLWVGTSHEMVVQADSIDQPTPINQIFPDSALAEVMRYQLGKSSVTDVVSQSELDNVTS VNGQKKEIISIEGVQYLTNLTNLLLAENNIRDIQPLENLTNLTVLNMIDNELTDISPLSNLTNLTKLSLGDDSIIDVSPL AGLTNLINLYLTSYDLTDVSELANLTNLTNLWLSSPKLSNVSVLSNFHNLETLQLRSTLVSDITPIANLKKLKLLDVSMN EIKDISSLSELSNLTELTLTDNHISDISALSELTNLNYLYLDVNQISDISALADLSNLEELYVMDQTITNEPLTFQTNIV INNTIKDENGALVTPLDISDNGSYTSPNITWNLPAYTDEVNYTFEKIGSIGNGPFYFTGTVYQPLEEVPATYNVIFDIDG VQNSEEVVVDALLEEPAAPTKEGYTFTGWYDAKTGGEKWDFTTDKMPAKDITLYAQFSINNYKAIFDVDGTTTSQTVNYQ SLLTKPTDPTKEGYTFTGWYDAKTGGNKWDFTTDKMPANDITLYAQFSKNPENGGTDTPSNGNKTKPEQPARENSTTITA IEKSTTLPKTGDNGTALLVLAGLLLTGASLLLTKQKKKSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 5e-115 | 49 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 6e-104 | 47 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 6e-105 | 47 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 1e-102 | 46 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 2e-74 | 44 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 3e-75 | 44 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 2e-75 | 44 |
| inlF | AAB67968.1 | internalin | Virulence | Internalin | Protein | 4e-87 | 42 |
