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Name : kdpB (lse_2587) Accession : YP_003465820.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Unknown Product : K+-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 2649099 - 2651144 bp Length : 2046 bp Strand : - Note : - DNA sequence : ATGATGGAAAAAGGTATTTGGAAAGATGCGCTAATTCAGTCAACGAAAAAATTGTCTCCGAAGTTACAAGTGAAAAATCC AGTGATGTTACTCGTTTATGTGGGTGCAATTTTGGCGACAGGGCTTTATTTTCTTGGCTTTTGGGGGATTTCAGATGAAA AAGCGGGTTATACACTCGCGATTGCGCTAATTTTGTGGTTTACCGTGTTATTTGCGAATTTTGCAGAGGCGATTGCGGAA GGCCGAGGTCGCGCACAGGCAGATAGTTTGAAGCTAGCTCGAAAAGATGTACTTGCTCGGAAATTGAAGACCGTGAGCGA CAAATCGGATGTTATCGAAGTAGCGTCTAATGATTTGAAAAAAGGCGATATTGTTTACGTGCTAGCGAATGAGCAGATAC CGATGGACGGGGAAGTTATTGAAGGAGCTGCTTCGGTTGACGAAAGTGCAATAACCGGGGAATCAGCGCCAGTAATTCGC GAGTCTGGTGGAGATAGAAGTGCTGTGACAGGCGGGACAACCCTTGTTTCGGATTGGCTTGTTATTGAAGTAACAGCAGT TTCTGGGGAAAGTTTCTTAGATAAAATGATTGCGATGGTTGAAGGTGCTTCGCGGAAAAAAACACCAAATGAAATTGCGT TACAGATTTTGTTAGTGACACTGTCGATTATTTTTCTAGCGGTTTCAGCAACTCTTTTGCCATTTACAGATTTTGCGAGT AAACAAGCGGGATCTGGGTCAGCGATTTCGATTACAAATGTGATTGCTTTGCTCGTTTGTTTGGCGCCAACAACAATTGG TGCGCTACTTTCTTCTATTGGAATTGCTGGGATGAGTCGTTTAAATCAGGCAAATGTCTTAGCGATGAGCGGTCGGGCAA TTGAAGCAGCGGGCGACGTCGATGTGCTGTTGTTAGATAAAACAGGAACAATTACGCTTGGAAATCGGAAAGCTAGTGAA TTTTTGCCAGTAGATGGGGTGACAGAGAAAGAACTAGCAGATGCGGCTCAACTTTCTTCTATTGCCGATGAAACTGCGGA AGGCCGGAGCATAGTTGTGCTAGCGAAAGAACGGTTCGATATCCGCGGTCGAGATTTTGCTGAAATGCATGCGGAATTCG TTCCATTCACAGCAACAACCCGAATGAGCGGAATCAATTATCAAGAAAATACGATTCGAAAAGGTGCCGCAGATGCGGTT CGGACGTATGTAACGAAAAATGGTGGAACGTATCCCAAAGAATGTGATGCGATAGTTAATAAAGTCGCTAACGCTGGTGG AACTCCGCTTGTTGTAGCTCGTAATAACAAAGTGCTTGGCGTTATTTATTTAAAAGATATTGTGAAAAACGGTGTGAAAG AACGTTTCCTTGATTTACGAAAAATGGGTATAAAAACAATTATGATCACCGGTGATAATCCGATGACCGCCGCAGCCATC GCAGCAGAAGCCGGAGTAGATGACTTTCTCGCAGAAGCCACTCCGGAAGCGAAACTAGAGTTGATTCGTAAATATCAACA AGAGGGACATTTAGTTGCGATGACTGGTGATGGAACAAATGATGCGCCGGCACTTGCACAAGCGGATGTAGCTGTGGCGA TGAATACTGGGACACAAGCTGCAAAAGAAGCAGGGAACATGGTTGACCTTGATTCTAGTCCAACAAAATTAATTGATATC GTCCGGATTGGTAAACAGCTTTTAATGACGCGAGGTGCGCTAACTACTTTTAGTGTGGCTAATGATTTAGCTAAATACTT TGCGATTATTCCAGTGCTTTTTTATGGGATATTCCCAGAACTTGCGGCGCTAAATTTAATGGGGCTAACTAGTCCAACAA GCGCAATTTTATCAGCGATTATCTACAATGCCGTCATTATCATCGCTTTAATCCCGCTATCTTTAAAAGGGGTTAAGTAC CGAGAAATGCCAGCTGGAAAGTTACTTAGTCGTAACATGTTGATTTACGGTTTGGGTGGATTGATTGCACCGTTTATTGC GATTAAATTGATTGATATGTTATTAACTATTTTAGGAATCGTATAG Protein sequence : MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATGLYFLGFWGISDEKAGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKLARKDVLARKLKTVSDKSDVIEVASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVIEVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTDFAS KQAGSGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVDGVTEKELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGINYQENTIRKGAADAV RTYVTKNGGTYPKECDAIVNKVANAGGTPLVVARNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIRKYQQEGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPELAALNLMGLTSPTSAILSAIIYNAVIIIALIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTILGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 72 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 72 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 9e-144 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 9e-144 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 9e-144 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 9e-144 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 6e-144 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 6e-144 | 56 |
