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Name : kdpD (lse_2585) Accession : YP_003465818.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Unknown Product : sensor histidine kinase KdpD Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2205 EC number : - Position : 2645821 - 2648511 bp Length : 2691 bp Strand : - Note : - DNA sequence : ATGGAGACGAATCGTCCAAGTCCAGAAGCATTACTTGTGAATTTGCAAGATGAAGCAGATTCACAAGTAGGTAAATTAAA AATATATTTTGGATTTGCAGCGGGTGTTGGGAAGACTTACGCAATGCTGAATGATGCGAAAGATCAGCTTACAAGCGGCG TCGATGTAGTGGCAGGTTATATTGAACCACATGCCAGAGCAGAAACGTTAAAAATGCTCGAAGGAATCCCAATTATTCCA CCTAAATCTGTTAATCATAAAAATATTTCACTAAAAGAATTTGACTTGGATGAAGCGTTGAAACGTAAGCCAGAACTGAT TTTAGTGGATGAACTTGCACACACGAATGCAGAAGGAGTAAGAAACAAGAAACGATTTCAAGACGTGGAAGAACTGTTGC AAGCGGGGATTGACGTTTATACGACGGTAAATGTGCAACATATTGAAAGTTTAAATGATATCGTGGAAGGCATTACGAAA GTCGCTGTCCGAGAAACGATTCCAGATTATGTTTTTGATGAAGCAGACCGTGTCAAGCTAATTGATATTGAACCAGATGA ACTTTTGAAACGATTAGAACAAGGGAAAATTTACCGGCCAGAACGCGCAAAAACAGCAATGCAGAACTTTTTTACAAGAG AAAATCTGAAATTATTACGTGAAATTGCGATGCGAAAAGCAGCAGACCGGATTAGCCATGAGTACGACCAAACCGGCGTT TATCCAGAAAAGCGAGCTAGCAGTAAATGGCTAGTTTGTATCGGCTCGGCGCCTTCTTCTGCAAAACTAATTCGCTGGAC AGCGCGCACTGCTGAAGCTTTCCGAGCGCCATGGATAGCTCTTTATGTCGAAAATGAAGAGACGGATTATTTGTCTAAAC AAGAGAAAAAATGCTTGCGCGAAACAATGGAACTTGCTGAAAGACTTGGCGCCGAAATTGTTACGCTAGCAGGACATGAT ATTGCGGAAACAGTGGCCCAGTATGCTCGTTTGACGGGTGTGACGAATATTGTTGTTGGGAAATCACGTCGGCGGATGGG GCTACGTTCCTTATTTGAAGATGATTTTGAAGATCAGCTTATTACGCATTTGGATAACGTTGATATGCATATTATCCCGT CCAGTAGCCCGGAAATCAAAAAGCGCCGAATGAAAATGCGTTTTAAAAGTTTCTTAACATGGCACGATATGGCAAAAATG GTACTATTACTCTGTTTAGCAACCGCAATATGTATTGGGCTTAGTGAATTAGGCATTGGGGACCAAAATGTTATTATGGT ATATATTTTATCCGTATTAATTATTTCTAGAGTAACAAGTGGTTATGTATATGGGGTTTTGGGTTCGATTATTGGTGTTA TGTTATTTAATTTCTTTTTTACATCGCCATTATATACTTTTAATACGATTCAAGCCGGTTATCCGGTGACATTCGGCATT ATGTTGCTTGTTGCGTTAATTACAAGTGCGCTAACCGTTCGAATCAAAACGCAGGCCAGCCTAGCTGTTGAGCGCGAACG CCGGACAGAAGTACTATACGAAATCAATAAACGTTTACTAATAACTCGAAATTTAAAAGGAATTATCGACTTAACAAATG AATATATTTTGCATTTATTTCAGCGCTCTGTTATTTTTTATTCTACAGATCCAGCTAAAAGTAGCAAAGGGATTTTTGTC CAAGCAGAAGGTAAGGAAGATGCAAGCGCGCTTTTGAACCCTGAGGAAGAAGCTGTGGCGCATTGGGTTTTTAAAAATAA AAAGAGGGCCGGTGCAGGAACAGACACATTAATGGGGGCGTTTGGTTATTATATGCCAGTGATGTCGCAAGGGAAAGTAC TTGGCGTGATTGGTGTTTCATGTTCGGCGGAAGATGGCCCGCTCACTCAAGATAATCGGATGTTCTTACGGATGATTAGC TCGCAAGTTGCCCTCGCATTAGAACGGCAATATTTATCAGAAGAGCAACGTCAAATCGTCATCGAATCGGTAAAAGAAAA AATGCGTAGTAACTTGCTTCGAGCTATTTCACACGACTTAAGAACGCCACTTACTGGAATCATTGGCGCAAGTTCAGCAC TTCTTGAGAAAGAAACCGAACTAGATAAAGCGACCCAACATGATTTAATTAAAGGTATTAAAGATGATTCGGGTTGGCTA ATTCGAATGGTGGAAAACCTGCTTTCTGTTACACGAATTAGCGAAGGTTTAGTGAGTTTGGAAAGAGAACCAGAAGCCGT GGAAGAAATTGTTGGGGAAGCAGTAGGTCGAATTAAAAAGCGTTTTACAGATCGAATTATTCATGTACAAGTTCCGCGCG ATTTGCTTATGGTTCCAATGGACGGGACGCTTATCGAACAAGTTTTAATCAATTTAATGGAAAATGCGCTTCGTCACGCA GGTGCGGATGCAGAAGTTTGGGTAGATGTAACGAAAACGGAAAACAGTGCGATATTTAGCGTTCGCGATAACGGAACTGG TATCCCGGAAAATCGTATGGCTGATTTATTTGATACGTTTGCAGTAGAGGCTAGAGAGCGCTCTGATATGTCGCGCGGTC TTGGGCTTGGTTTATCCATCTGTATGTCGATTATTCGCGCACATGATGGAACCATTGAAGCGAAAAATAACGAACTTGGC GGAGCGACATTCTGGTTTACTTTGCCATTAGATGGAGGAGACGAGCAGTGA Protein sequence : METNRPSPEALLVNLQDEADSQVGKLKIYFGFAAGVGKTYAMLNDAKDQLTSGVDVVAGYIEPHARAETLKMLEGIPIIP PKSVNHKNISLKEFDLDEALKRKPELILVDELAHTNAEGVRNKKRFQDVEELLQAGIDVYTTVNVQHIESLNDIVEGITK VAVRETIPDYVFDEADRVKLIDIEPDELLKRLEQGKIYRPERAKTAMQNFFTRENLKLLREIAMRKAADRISHEYDQTGV YPEKRASSKWLVCIGSAPSSAKLIRWTARTAEAFRAPWIALYVENEETDYLSKQEKKCLRETMELAERLGAEIVTLAGHD IAETVAQYARLTGVTNIVVGKSRRRMGLRSLFEDDFEDQLITHLDNVDMHIIPSSSPEIKKRRMKMRFKSFLTWHDMAKM VLLLCLATAICIGLSELGIGDQNVIMVYILSVLIISRVTSGYVYGVLGSIIGVMLFNFFFTSPLYTFNTIQAGYPVTFGI MLLVALITSALTVRIKTQASLAVERERRTEVLYEINKRLLITRNLKGIIDLTNEYILHLFQRSVIFYSTDPAKSSKGIFV QAEGKEDASALLNPEEEAVAHWVFKNKKRAGAGTDTLMGAFGYYMPVMSQGKVLGVIGVSCSAEDGPLTQDNRMFLRMIS SQVALALERQYLSEEQRQIVIESVKEKMRSNLLRAISHDLRTPLTGIIGASSALLEKETELDKATQHDLIKGIKDDSGWL IRMVENLLSVTRISEGLVSLEREPEAVEEIVGEAVGRIKKRFTDRIIHVQVPRDLLMVPMDGTLIEQVLINLMENALRHA GADAEVWVDVTKTENSAIFSVRDNGTGIPENRMADLFDTFAVEARERSDMSRGLGLGLSICMSIIRAHDGTIEAKNNELG GATFWFTLPLDGGDEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpD | NP_814336.1 | sensor histidine kinase KdpD | Not tested | Not named | Protein | 6e-143 | 41 |
| ef0090 | AAM75293.1 | EF0090 | Not tested | Not named | Protein | 4e-143 | 41 |
