Gene Information

Name : fhuC3 (lse_2329)
Accession : YP_003465562.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2392901 - 2393692 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACCAGCATTAGAACTAAAAAATATTTCTTTCTCGCGCAAAAGAGATTTTCAAATGTCAGATATCAATGCAGCTAT
TCCGGAGGGCAAAATTACAACTCTTATCGGCCCAAATGGTTCTGGGAAATCAACTATGTTACGTTTAATGATGCGACTTT
TGACACCAGATAGTGGGGAGATTTTATTAGGCGAAAAAAACATTACTGATATCTCAGCAAAAGAACTAGCGAAAAAAATG
ACGATGTTAGCACAGGCACCAGAAGGTCTAGTAGATGTCATTGTTCATGATTTAGTGGCGTATGGTCGCTTGCCTTACCG
AAGCTTTCTATCGACCTTACAAGATGAAGATGAGGCCGTAATCCAGTGGGCTATTAAAGTTTGCAACTTAGAAAATTTGG
CATATCGACCGCTCCATTCGTTATCTGGCGGTGAACGACAACGGGCATGGCTTGCGATGGCATTAGCTCAAAAAACGCCG
ATTCTACTACTTGATGAACCAACAACCTATCTTGATATCGCTCATCAACTAGAACTATTAGATTTGCTTGTTCATTTAAA
TAAAGAATACAATTTAACGATTGTTTTAGTGTTACATGACTTAAATCAAGCTGCGATTTACAGTGATTATGTCTTTGTTT
GTGAAAATGGTCGCTTAGTGAAAAGTGGTACACCAAAAGAAGTGTTCACGATTGACTTGCTAAAAAATGTTTTCCATATT
ACTGCTGACATTACCGAAAAAAACGGCAAACAACATATTCATCCGCTTGCTTCGACGAGATTTGAATATTAA

Protein sequence : 
MKPALELKNISFSRKRDFQMSDINAAIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEILLGEKNITDISAKELAKKM
TMLAQAPEGLVDVIVHDLVAYGRLPYRSFLSTLQDEDEAVIQWAIKVCNLENLAYRPLHSLSGGERQRAWLAMALAQKTP
ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDYVFVCENGRLVKSGTPKEVFTIDLLKNVFHI
TADITEKNGKQHIHPLASTRFEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-38 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-41 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-41 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-35 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-40 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-40 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-40 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-40 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-34 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-34 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-34 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC3 YP_003465562.1 iron ABC transporter ATP-binding protein BAC0164 Protein 3e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC3 YP_003465562.1 iron ABC transporter ATP-binding protein VFG1042 Protein 2e-38 49
fhuC3 YP_003465562.1 iron ABC transporter ATP-binding protein VFG0925 Protein 5e-35 42