Gene Information

Name : lse_2278 (lse_2278)
Accession : YP_003465511.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2347766 - 2348446 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAACTCTACTATCGTTTGAAAATGTTTATAAAGATTATCCGTCCGGTCCTTCAATTATTCATGCACTGAAGGAAAC
GAACTTTGAAGCTAAGAAAGGCGAACTTATTGCAATTGTTGGCCCAAGTGGTTCTGGTAAAAGTACGTTACTTTCGCTTG
CAGGCGCGCTTTTAACACCAACTGGCGGAACTATTTCGATTAATGATAAGTCCATTAGTAACTTATCAGCAAAAGAGCAA
ACTTCTCTTCGTTTAGAAGAAATCGGCTTTATTTTCCAAGCTGCTCACCTTGTTCCTTACTTACGTGTGAAGGATCAAAT
TGGCTTTATTGGAAAAATGGCTGGGAAAAATGCTGCTGAATTAGAAAAAGAAGCTACTGCCTTGCTTGCTCAACTTGGAA
TCGCTGACCGGGCAAACGCTTTTCCAAAAGACTTATCAGGTGGTCAAAAGCAACGTGTCGCAATTGCACGGGCGCTTATT
AATCAGCCGTCTGTTATCTTAGCGGATGAGCCCACTGCCAGCCTTGATACAGCAAGAAGTCGAGAAGTTGTGACGTTGCT
TCGTGATGAAGTAGTGCAAACTAGTCGGACTGCGATTATGGTTACACATGATGAACGGATGTTAGATCTAGTTAACCATG
TGTATCGTATGGAAGATGGCTTGCTTACTCAAGAAAGTTAA

Protein sequence : 
METLLSFENVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSGSGKSTLLSLAGALLTPTGGTISINDKSISNLSAKEQ
TSLRLEEIGFIFQAAHLVPYLRVKDQIGFIGKMAGKNAAELEKEATALLAQLGIADRANAFPKDLSGGQKQRVAIARALI
NQPSVILADEPTASLDTARSREVVTLLRDEVVQTSRTAIMVTHDERMLDLVNHVYRMEDGLLTQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 7e-34 49
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 3e-28 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lse_2278 YP_003465511.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-25 43
lse_2278 YP_003465511.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-23 42