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Name : clpC (lse_0218) Accession : YP_003463459.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Virulence Product : ClpC ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 235648 - 238110 bp Length : 2463 bp Strand : + Note : - DNA sequence : ATGATGTTTGGACGTTTTACGCAAAGAGCTCAGAAAGTACTCGCTTTGTCACAAGAAGAGGCAATGCGTTTGAATCATAG TAATTTAGGTACGGAGCATATACTGCTTGGACTTGTAAGAGAAGGCGAAGGAATTGCAGCGAAAGCACTTTATGAACTTG GGGTTAGTTCGGAAAAAGTACAGCAAGAAGTAGAAGGGTTAATCGGACATGGCGAAAAGGCGGTGACGACAATTCAATAT ACTCCTCGCGCGAAAAAGGTAATAGAACTTTCAATGGATGAGGCTCGTAAACTTGGACATACTTACGTTGGAACAGAGCA TATTTTATTAGGGCTTATTCGTGAAGGCGAAGGAGTTGCGGCTAGGGTTTTAAGTAATCTAGGTATTAGTTTAAATAAAG CTAGACAGCAAGTATTACAATTGCTTGGGGGCGGCGATGCTACTGGCGCTGGAAGGCAAACAAATACACAAGCGACGCCA ACTTTGGATAGTTTAGCTCGTGATTTGACTGTAATTGCTCGTGAGGATAATTTGGATCCGGTTATTGGTCGTTCTAAAGA AATCCAACGTGTTATTGAAGTGTTAAGTCGTCGAACAAAAAATAACCCAGTTTTAATTGGGGAACCAGGTGTAGGTAAGA CAGCGATTGCGGAGGGGCTAGCACAGCAAATTGTACGCAATGAAGTTCCTGAGACGTTGCGAGGAAAACGTGTAATGACG CTTGATATGGGGACTGTCGTTGCAGGAACTAAATATCGTGGTGAATTTGAAGACCGGTTGAAAAAAGTAATGGATGAAAT TCGCCAAGCAGGAAATGTGATTTTATTTATTGACGAACTTCATACACTGATTGGTGCTGGCGGGGCGGAAGGTGCGATAG ATGCATCTAACATTTTGAAGCCACCTCTAGCTCGTGGAGAGTTGCAATGTATTGGTGCAACAACACTTGATGAATACAGA AAATACATTGAAAAAGACGCAGCACTTGAAAGACGTTTCCAACCAATTAAGGTAGATGAACCTTCTGTTGAGGAGTCTAT TCAAATTTTGCATGGTTTACGTGATCGTTATGAAGCGCATCACCGTGTTGCGATTACTGATGAGGCGCTTGATGCAGCTG TTCGGTTGTCAGATCGCTATATTTCTGACCGTTTCTTACCTGATAAAGCAATTGATGTGATTGATGAAGCTGGTTCTAAA GTACGCTTGAAATCTTTTACAACGCCAAAAAATGTAAAAGAAATGGAAAATAATTTAACTGATTTGAAAAAAGAAAAAGA TGCCGCTGTTCAAGGTCAAGAATTTGAAAAAGCAGCAGCATTACGTGATAAAGAGCATAAACTTAAGAAATCTTTAGAAG AAACAAAAGCTAATTGGAAAGAAAAACAAGGTCTTGATCATAGTGAAGTAACAGAGGATATTGTCGCGGAAGTTGTCGCT AGTTGGACGGGAATCCCGGTTGCTAAATTGGCTGAAACAGAAACCAATAAGTTACTCAATATGGAAAAACTTTTACATGA GCGGGTAATTGGTCAAGATGCTGCTGTTAAGGCTGTATCGCTAGCTGTACGTCGAGCTCGTGCTGGACTTAAAGATCCAA AACGTCCGATTGGTTCCTTTATATTCCTTGGACCAACTGGTGTCGGGAAAACCGAACTAGCTCGTGCACTTGCGGAGTCG ATGTTTGGCGATGAGGATTCGATGATTCGGATTGATATGTCAGAGTACATGGAGAAATTTTCTACCGCTCGTTTAGTAGG AGCTCCTCCCGGCTATGTTGGGTATGAAGAAGGTGGACAATTAACAGAAAAAGTTCGTCAAAAACCTTATTCGGTAGTTC TTTTAGACGAAATTGAAAAAGCGCATCCAGATGTATTTAATATGTTACTGCAAGTGCTGGATGATGGTCGTTTAACTGAT TCTAAAGGTCGAGTAGTTGATTTTAGAAATACTGTTATTATCATGACTTCCAATATCGGTGCTCAAGAAATGAAACAAGA TAAATCAATGGGATTCAATGTGACTGATCCACTTAAAGACCACAAAGCAATGGAACACCGTGTTTTACAAGATTTAAAAC AGGCATTTCGTCCAGAGTTTATTAACCGGATTGATGAAACAATTGTATTCCATTCACTTCAAGAGAAAGAATTAAAACAA ATTGTTACGCTTCTTACGGCTCAACTAACTAAACGCCTGTCAGAACGTGATATTCATGTGAAACTAACTGAAGGAGCTAA ATCTAAAATCGCTAAAGATGGCTATGATCCTGAGTACGGGGCGCGTCCTTTGAAACGAGCTATTCAAAAAGAAGTGGAAG ATATGCTTTCTGAAGAATTGCTTCGAGGTAATATTAAAGTAGGCGATACCATTGAAATTGGTGTGAAAGATGGTAAATTA GAAGTTAGACAAAAGGCTGCCCCTAAAAAGAAAGCTACACCAAAAAAAGTTAAAACCAAATAA Protein sequence : MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGVSSEKVQQEVEGLIGHGEKAVTTIQY TPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATP TLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMT LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYR KYIEKDAALERRFQPIKVDEPSVEESIQILHGLRDRYEAHHRVAITDEALDAAVRLSDRYISDRFLPDKAIDVIDEAGSK VRLKSFTTPKNVKEMENNLTDLKKEKDAAVQGQEFEKAAALRDKEHKLKKSLEETKANWKEKQGLDHSEVTEDIVAEVVA SWTGIPVAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES MFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVTDPLKDHKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQ IVTLLTAQLTKRLSERDIHVKLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDTIEIGVKDGKL EVRQKAAPKKKATPKKVKTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003463459.1 | ClpC ATPase | VFG0079 | Protein | 0.0 | 99 |
| clpC | YP_003463459.1 | ClpC ATPase | VFG0080 | Protein | 1e-155 | 53 |
