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Name : pdp (lse_1975) Accession : YP_003465208.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 2028548 - 2029849 bp Length : 1302 bp Strand : - Note : - DNA sequence : GTGAGAATGGTGGATATTATTTCCAAAAAAAGGGATGGTAAAGCTTTATCAACCGAAGAAATTCAGTTTTTCATTGATGG GTATACGAATGGGGAAATTCCAGATTATCAAGCAAGTGCTCTAGCCATGGCCATCTTTTTCCAAGATATGAATGACGAGG AGCGCGCCGATTTAACAATGGCAATGGTTGGCTCCGGAGATACGATTGATTTATCCGCAATTGAAGGAATCAAAGTCGAT AAACATAGTACAGGCGGTGTAGGCGATACAACAACACTTGTTCTTGCCCCACTAGTTGCAGCAGTCGGCGTTCCAGTTGC AAAAATGTCCGGTCGTGGCTTAGGTCATACTGGTGGAACTATTGATAAACTAGAATCAATCGCAGGTTTCCACATTGAAC TAGACAAAAAAGATTTTATTAATTTAGTCAATCGCGATAAAGTAGCCGTTATTGGGCAATCAGGTAATTTAACTCCTGCT GATAAAAAAATGTACGCGCTTCGTGATGTAACAGGAACCGTTAATTCCATCCCGTTAATCGCCAGCTCGATTATGAGTAA AAAAATTGCTGCCGGTGCAGACGCCATCGTGCTTGATGTGAAAACAGGTGCTGGTGCATTTATGAAAACCGATGAAGATG CCGAAAATCTAGCTCATGCAATGGTTCGAATCGGCAATAATGTCGGTCGTAATACAATGGCCGTTATTTCTGACATGTCT CAACCACTTGGTGAAGCAATCGGAAACGCCCTAGAAGTCAAAGAAGCAATTGATACGTTAAAAGGAGAAGGTCCAAAAGA CTTAACCGAATTAGTATTAGTTTTAGGTAGCCAAATGGTTGTCTTAGCAAAACAAGCGGAAACACTAGAAGAAGCGCGCG CCAAGCTAATCGAAGTAATCGAAAACGGTGCAGCATTAGAAAAATTCAAGACCTTCCTTGCTAACCAAGGTGGCGACGCA AGCATTGTCGATCATCCTGAAAAACTTCCACAAGCTAAATTCCAAATCGAAGTTCCAGCAAAAACATCCGGCTTTGTAAG CAAAATTATCGCTGACGAAATTGGAATCGCGGCAATGATCTTAGGTGCTGGACGCGCAACAAAAGAAGACGAAATTAATC TAGCGGTCGGTTTAATGCTCCGTAAAAAAGTAGGAGACCCTGTCAAAGCAGGCGAACCACTAGTAACGATTTTTGCAGAC CAAGAAGATGTAGAAAACGTTAAAGCAAAAATCTACGAAAACATTGAAATTTCCAATCAAGCAGTAGCACCAACCCTTAT TCATAAAGTAATTACAGAATAA Protein sequence : MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMAIFFQDMNDEERADLTMAMVGSGDTIDLSAIEGIKVD KHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIAGFHIELDKKDFINLVNRDKVAVIGQSGNLTPA DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLAHAMVRIGNNVGRNTMAVISDMS QPLGEAIGNALEVKEAIDTLKGEGPKDLTELVLVLGSQMVVLAKQAETLEEARAKLIEVIENGAALEKFKTFLANQGGDA SIVDHPEKLPQAKFQIEVPAKTSGFVSKIIADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDPVKAGEPLVTIFAD QEDVENVKAKIYENIEISNQAVAPTLIHKVITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-68 | 47 |
