Gene Information

Name : fhuC1 (lse_1947)
Accession : YP_003465180.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1998923 - 1999747 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGACCTGCATACCGATAACTTACAAATTTCATACGACAAGCGAATCATTGTTGATGGTTTAGATATAGCCATTCC
GGCGAACAAAATAACCGCTCTAGTTGGCGCGAATGGTTCTGGAAAATCGACTATTTTAAAAACAATGTCTCGGTTAATGA
AGCCGAGTCACGGAGCTGTATATTTGGACGGCAAAAGTATTCATCGTCAGCCGACAAAAGAAATCGCTAAACAATTAGCG
ATACTACCTCAAAACCCTTCTGCGCCGGATGGATTAACCGTATTTGAATTAATTTCTTACGGCCGTTCTCCGCATCAAAG
TAGCTTCAAATCAATTACCGCAAAAGATCGAGAAATTATTTTCTGGTCGTTGCGCGTAACTAATTTGACAGAATTTGCTG
ACCGACCAATTGATAGTTTGTCTGGTGGACAGCGCCAGCGAGCTTGGATTGCAATGGCTCTTGCCCAAGAAACAGATGTA
TTATTTTTAGATGAGCCGACAACATTTTTAGATATGACCCACCAGTTAGATGTCCTTAATTTACTCAAACAATTAAACCA
ATCTGAAAACCGGACGATAATTATGGTTGTTCATGATTTAAACCACGCATCCCGTTATGCGCACCACATGATTGCTATTA
AAGAAGGCCAAGTAATTGCAGAAGGAACCCCAGTCAGTGTGATGACCGAACAAACACTAGAAGATGTCTTTAATATCAAA
GCAGATATCTTAATCGACCCACGTAGCGGCGTTCCACTTTGCCTTCCCTATGAAACTTGTAACGGTTGCGAAATTGTAAA
GGAGCTTGATTCCATTGTCAAATGA

Protein sequence : 
MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKSTILKTMSRLMKPSHGAVYLDGKSIHRQPTKEIAKQLA
ILPQNPSAPDGLTVFELISYGRSPHQSSFKSITAKDREIIFWSLRVTNLTEFADRPIDSLSGGQRQRAWIAMALAQETDV
LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIIMVVHDLNHASRYAHHMIAIKEGQVIAEGTPVSVMTEQTLEDVFNIK
ADILIDPRSGVPLCLPYETCNGCEIVKELDSIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-58 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-58 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-54 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-50 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-50 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-50 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-50 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-52 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-55 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC1 YP_003465180.1 iron ABC transporter ATP-binding protein BAC0164 Protein 1e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC1 YP_003465180.1 iron ABC transporter ATP-binding protein VFG0925 Protein 5e-57 46
fhuC1 YP_003465180.1 iron ABC transporter ATP-binding protein VFG1042 Protein 1e-52 43