Gene Information

Name : lse_1829 (lse_1829)
Accession : YP_003465064.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Resistance
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1883824 - 1884546 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGAATATCCAAGGTTTAACAATAGCGTATAACCAAAAAATTGCGATTGATAATGTATCACTTCAAATAGCATCAGGAAA
ATTAACAGGGATAGTCGGGCCAAATGGAGCAGGTAAATCCACATTATTAAAAGGAATGATGGGTTTAATTCCTCGAGAAA
ATGGCCAAGTCACTCTAGACGGAAAACCACTTTCGTTTTGGCGGAAAAGTATTGCTTATGTACCACAAAGAAGTGAAGTG
GATTTAACCTTTCCGATTACAGTCTTTGATATGGTTTTGCTTGGAACTTATCCAGCGCTTGGTTTAATTAAACGCCCCGG
CAAAAAAGAAAAACAACTTGCTCTAGATGCACTAGAACAAGTGGAAATGACTGCTTTTCAGAAACGGCAAATAGGAGAGT
TATCAGGCGGACAACTGCAACGAGTTTTTATTGCGCGGGCACTAGCACAGCATGCAGAAATTTTCTTTTTAGATGAGCCT
TTTGCAGGGATTGATATGACGAGTGAAGCACTAATTATGAGGTTGTTAAAAAAATTAAGAGATAACGGCAAAACGATTGT
CGTCGTGCATCATGATTTTCATAAAGTAGCTACTTATTTCGATGATATTATTTTACTCAATAAAAAATTAGTAGCGCATG
GACCTGTAGAACAGACTTTTACAGAAGAAAAAATTAAATTTGCTTACGGTGATGCGCCATTAGCATTTGCAGAGGGGGTA
TAG

Protein sequence :
MNIQGLTIAYNQKIAIDNVSLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPRENGQVTLDGKPLSFWRKSIAYVPQRSEV
DLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTAFQKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVATYFDDIILLNKKLVAHGPVEQTFTEEKIKFAYGDAPLAFAEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-54 51
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-54 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lse_1829 YP_003465064.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 2e-59 55
lse_1829 YP_003465064.1 manganese ABC transporter ATP-binding protein BAC0440 Protein 2e-45 42