Gene Information

Name : lse_1827 (lse_1827)
Accession : YP_003465062.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1882053 - 1882982 bp
Length : 930 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAACTAATTTTTGCAGCTCTAATGATGTTAGTAATAGTGCTTGCCGGGTGTTCTTCTGGAAACAAGGAAACGGA
AAAAGATGGTAAATTAAATGTGGTGGCGACTTATTCGATTTTAGCAGATATTGTCCAAAATGTCGGTGGCGATAAAATCG
AAATCCATAGTATTGTTCCTGTAGGAGTGGATCCACATGAATATGACCCACTACCAGCCAATATTCAAAGTGCGGCGGAT
GCAGATTTAATTTTTTACAATGGCTTAAATCTGGAAACAGGGAATGGCTGGTTTGATCGAATGTTAGAGACCGCAGATAA
ATCACGTGATGACAAGGACCAAGTGGTGGAGCTAAGTAAAGGCGTCAAACCTAAATACTTAACCGAAAAAGGCAAAACTT
CGGAAACAGATCCACATGCATGGCTTGATCTTCATAACGGAATTATTTATACAGAAAATGTGCGGGATGCGCTCGTAAAA
GCAGACCCAGACAATGCGGATTATTATAAAGAGCGAGCAGAAAAATATATTACTAAGCTAGCAACATTGGATAAAGAAGC
AAAACAAAAATTTGCGGATTTACCAGAAAATCAAAAAACATTAGTTACAAGTGAAGGGGCTTTTAAATATTTTGCAGCAA
GATACGGTCTAAAAGCGGCTTATATTTGGGAGATTAATACTGAAAGTCAAGGAACCCCAGACCAAATGAAGCAAATAGTG
GGCATTGTTGAAAAAGAAAAAGTTCCTAATTTATTTGTAGAAACAAGTGTCGACCCAAGAAGTATGGAAAGTGTATCTAA
AGAAACCGGCGTGCCAATTTTCGCCAAGATTTTTACAGATTCTACCGCTAAAAAAGGCGAAGTAGGCGATACTTATTTAG
AAATGATGCGTTATAATTTAGATAAAATTCATGATGGATTGGCAAAATAA

Protein sequence :
MKKLIFAALMMLVIVLAGCSSGNKETEKDGKLNVVATYSILADIVQNVGGDKIEIHSIVPVGVDPHEYDPLPANIQSAAD
ADLIFYNGLNLETGNGWFDRMLETADKSRDDKDQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALVK
ADPDNADYYKERAEKYITKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQIV
GIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMRYNLDKIHDGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 2e-80 52
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 1e-80 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lse_1827 YP_003465062.1 ABC transporter substrate-binding protein VFG2157 Protein 1e-133 93
lse_1827 YP_003465062.1 ABC transporter substrate-binding protein VFG2165 Protein 3e-81 60
lse_1827 YP_003465062.1 ABC transporter substrate-binding protein VFG1359 Protein 2e-81 52