Gene Information

Name : prfA1 (lse_0180)
Accession : YP_003463423.1
Strain : Listeria seeligeri SLCC3954
Genome accession: NC_013891
Putative virulence/resistance : Virulence
Product : listeriolysin positive regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0664
EC number : -
Position : 182929 - 183642 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
GTGAGCACTAAAGCAGAGGATTTTAAAGAATACTTAGAATCTAACGGGATTCAACCGAAATATTTTCAAAAGAAGGAATT
TATTTTTAGTCAATGGGAGCCAAACGAATACTGTATATTTCTGCATGAAGGGGTTGCAAAACTTACTAGTATCAGTGAGA
GCGGGGATATTCTGAATTTACAATACTATAAAGGCGCTTTCATAATAATGACTGGTTTTATCGATACAGAAAAATCTCTA
GGGTATTATAATTTAGAAGTTGTTAGCGAGCAAGCCGCAGCCTATATTATAAAAATAAGCGATTTAAAAGAGTTGGTTTC
AAAAGATCTCAAACAGCTTTTTTATATTATAGATACCTTACAAAAGCAAGTATCTTATAGTTTAGCTAAGTTTAATGATT
TTTCCTCTAATGGAAAAGTAGGCTCCATTTGTGGCCAATTTTTAATTTTAGCCTATGTTTATGGAGAGGAAACTCCTAAT
GGAATCAAAATAACATTAGAAAAACTCACAATGCAGGAGCTAGGTTGTTCAAGTGGAATAGCTCATAGCTCAGCAGTTAG
TAGAATTATTTCTAAACTAAAACAAGAAAACGTCATTGAGTACAAAGACTCTTACTTTTATATAAAAAATATCGCTTATC
TCAAAAAAATCGCCCCTAAAATTGACGAATGGTTCTACTTAGCTTGTCATAATTCATGGGATAAGTTTAACTAA

Protein sequence : 
MSTKAEDFKEYLESNGIQPKYFQKKEFIFSQWEPNEYCIFLHEGVAKLTSISESGDILNLQYYKGAFIIMTGFIDTEKSL
GYYNLEVVSEQAAAYIIKISDLKELVSKDLKQLFYIIDTLQKQVSYSLAKFNDFSSNGKVGSICGQFLILAYVYGEETPN
GIKITLEKLTMQELGCSSGIAHSSAVSRIISKLKQENVIEYKDSYFYIKNIAYLKKIAPKIDEWFYLACHNSWDKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfA CAA05714.1 PrfA Virulence LIPI-1 Protein 8e-87 74
prfA CAA51231.1 Listeriolysin regulatory protein Virulence LIPI-1 Protein 6e-82 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prfA1 YP_003463423.1 listeriolysin positive regulatory protein VFG0072 Protein 4e-87 74