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Name : arsB (lse_1217) Accession : YP_003464454.1 Strain : Listeria seeligeri SLCC3954 Genome accession: NC_013891 Putative virulence/resistance : Resistance Product : arsenic efflux pump protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1238445 - 1239740 bp Length : 1296 bp Strand : + Note : - DNA sequence : ATGCAAGTCATATTGGCTATTTTAGTTTTTATTATTACATTAATATTTGTCATTTGGCAGCCAAACAAATTGTCGATTGG TTGGTCAGCTTGCGGAGGCGCTTTAATTGCTTTATTACTTGGAGTTGTTACTTTCCATGATATTGCGACAGTCACAGGAA TCGTTTGGAATGCAACATTAGCCTTTATTGCTATTATCATTATCTCGCTTATTTTAGATGAAATTGGATTTTTTGAATGG GCGGCATTACACATGGCTCGACTGGCTCGTGGGAATGGCCTTGTGATGTTTGTTCTTATTGCGGTTTTAGGTTCTGTCGT AGCAGCGTTCTTCGCAAATGATGGAGCAGCACTTATTTTGACACCGATTGTACTGGCGATGGTTCGAGCCCTCAAATTCG ATGAGCAAAAAGTATTTCCATTTATTATTGCAAGTGGCTTCATCGCGGACACAACTTCTTTGCCTCTTGTTGTAAGTAAT TTAGTAAATATTGTTTCAGCAGATTTTTTTGGAATTTCATTTTCCGAGTATGCACTTATGATGTGGATACCTACAATATT CTCGTTAGTCGCAAGTATTTTGATACTTTACCTTTATTTTCGAAAAGCTTTATCAAGAAGGTACGATGATTCCGAACTGA AAAAACCGGAGTCAGCATTAAAAGATAAAAAAATGTTTTACATATCATGGATAATTTTAATAATTCTCGTAGTAGGGTAT TTTTCAAGTAGTTTTTTAGATATTCCAGTTTCCTTTACTGCTTTAATAGTCGCATTTGTTTTTTTACTGGTAGGGAAAAA AAGCCAGGCTGTCTCAACGAAAGCAATTTTAAAAGGTGCACCATGGAATATTGTCTTTTTCTCGATTGGGATGTATGTTG TCGTATATGGCTTACAAAATGTTGGCATTACTAAATTTTTATCTCATGCAGTAGAGTATGTTGCGGGCTACGGTTTATTT ATTGGCACACTTGGAATGGGATTTATTGCAGCATTGCTCTCATCAGTTATGAATAATTTACCGACAGTGATGATTAATGC ACTAGCGATTGAACATACACCTTATACTGGGATAATGAAAGAGGCACTCATTTATGCCAATGTAATCGGATCTGATTTAG GTCCAAAAATAACGCCAATCGGTTCTTTAGCAACGCTTTTATGGCTACATGTTTTAGCGCAGAAAAAAATAAAAATAAGT TGGGGCATGTATTTTAAAATTGGCATTGTTATTACGATTCCTGTTCTTTTTGCAACACTTGTAGGTCTGTATCTTTCTTT ATTAATATGGAACTAA Protein sequence : MQVILAILVFIITLIFVIWQPNKLSIGWSACGGALIALLLGVVTFHDIATVTGIVWNATLAFIAIIIISLILDEIGFFEW AALHMARLARGNGLVMFVLIAVLGSVVAAFFANDGAALILTPIVLAMVRALKFDEQKVFPFIIASGFIADTTSLPLVVSN LVNIVSADFFGISFSEYALMMWIPTIFSLVASILILYLYFRKALSRRYDDSELKKPESALKDKKMFYISWIILIILVVGY FSSSFLDIPVSFTALIVAFVFLLVGKKSQAVSTKAILKGAPWNIVFFSIGMYVVVYGLQNVGITKFLSHAVEYVAGYGLF IGTLGMGFIAALLSSVMNNLPTVMINALAIEHTPYTGIMKEALIYANVIGSDLGPKITPIGSLATLLWLHVLAQKKIKIS WGMYFKIGIVITIPVLFATLVGLYLSLLIWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-122 | 68 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 1e-115 | 67 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-113 | 65 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-95 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_003464454.1 | arsenic efflux pump protein | BAC0575 | Protein | 1e-118 | 66 |
| arsB | YP_003464454.1 | arsenic efflux pump protein | BAC0574 | Protein | 4e-116 | 66 |
| arsB | YP_003464454.1 | arsenic efflux pump protein | BAC0578 | Protein | 5e-96 | 58 |
| arsB | YP_003464454.1 | arsenic efflux pump protein | BAC0577 | Protein | 2e-95 | 58 |
| arsB | YP_003464454.1 | arsenic efflux pump protein | BAC0031 | Protein | 1e-92 | 57 |
| arsB | YP_003464454.1 | arsenic efflux pump protein | BAC0576 | Protein | 5e-95 | 57 |
