Gene Information

Name : DehalGT_0891 (DehalGT_0891)
Accession : YP_003462710.1
Strain : Dehalococcoides sp. GT
Genome accession: NC_013890
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 850684 - 851367 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: det:DET1058 DNA-binding response regulator

DNA sequence :
ATGTCCAAGAAAATACTGATAGCTGATGATGAAAAAAGGATAGCGGAAATCCTGCAAGCCTATTTGGAACGTGAAGGCTT
CAGGGTGATAGCTACTTATGACGGCAAGACAGCCTTAGCCAAATTTCACGAAGAAAACCCTGACCTGATAATACTTGACC
TGATGCTGCCTGAAATATCCGGCTGGGATGTCTGCCGCGAAATCCGCAAGGAAAGCCGTGTACCTATAATAATGCTTACC
GCCCGTGACGAACTCACCGACAAGCTTATAGGACTGGAAATTGGGGCGGATGATTATATGACCAAGCCCTTTGAGTCCAA
GGAACTGGTAGCCCGCGTCAAAGTCCAGCTCAGACGGTCTGAATACCCCCCCAGCCCTGATTCAGCACTGGTTATTGACC
AACTGGAGATAGATCAGGAACGGCGTCTGGTCAAGATTGATGGCAAAACTGTAGACCTGACCGCCACCGAATTTGATATA
TTGATAAGCTTGGCCGTAAGTCCGGGTCGGGTTTTTTCCCGTATGCAGATATTGGACAAGCTGGGCGAAGCTTACGAAGG
ATATGAACGCACCATAGACAGCCATATTAAAAATCTACGAAAAAAAATAGAGCCTAACCTCGAATCCCCTACCTATATCC
TGACCGTACACGGGGTGGGCTACAAGATGAAAGACAGAGGATAA

Protein sequence :
MSKKILIADDEKRIAEILQAYLEREGFRVIATYDGKTALAKFHEENPDLIILDLMLPEISGWDVCREIRKESRVPIIMLT
ARDELTDKLIGLEIGADDYMTKPFESKELVARVKVQLRRSEYPPSPDSALVIDQLEIDQERRLVKIDGKTVDLTATEFDI
LISLAVSPGRVFSRMQILDKLGEAYEGYERTIDSHIKNLRKKIEPNLESPTYILTVHGVGYKMKDRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_012469.1.7685629. Protein 3e-44 48
DehalGT_0891 YP_003462710.1 transcriptional regulator AE000516.2.gene3505. Protein 6e-36 46
DehalGT_0891 YP_003462710.1 transcriptional regulator HE999704.1.gene2815. Protein 7e-40 45
DehalGT_0891 YP_003462710.1 transcriptional regulator AM180355.1.gene1830. Protein 8e-37 44
DehalGT_0891 YP_003462710.1 transcriptional regulator AF155139.2.orf0.gene Protein 4e-38 44
DehalGT_0891 YP_003462710.1 transcriptional regulator FJ349556.1.orf0.gene Protein 4e-35 44
DehalGT_0891 YP_003462710.1 transcriptional regulator CP000034.1.gene2186. Protein 2e-40 44
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_002695.1.916589.p Protein 2e-40 44
DehalGT_0891 YP_003462710.1 transcriptional regulator BAC0039 Protein 2e-40 44
DehalGT_0891 YP_003462710.1 transcriptional regulator CP001138.1.gene2239. Protein 1e-40 44
DehalGT_0891 YP_003462710.1 transcriptional regulator BAC0596 Protein 1e-40 44
DehalGT_0891 YP_003462710.1 transcriptional regulator AF162694.1.orf4.gene Protein 5e-32 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_014475.1.orf0.gen Protein 2e-36 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_005054.2598277.p0 Protein 2e-36 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_011595.7057856.p0 Protein 2e-38 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_010400.5986590.p0 Protein 6e-38 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_010410.6002989.p0 Protein 2e-38 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_002952.2859905.p0 Protein 4e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_003923.1003749.p0 Protein 5e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_002758.1121668.p0 Protein 6e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_009641.5332272.p0 Protein 6e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_013450.8614421.p0 Protein 6e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_007793.3914279.p0 Protein 6e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_007622.3794472.p0 Protein 4e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_002745.1124361.p0 Protein 6e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_009782.5559369.p0 Protein 6e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator NC_002951.3237708.p0 Protein 6e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator CP004022.1.gene1676. Protein 2e-36 43
DehalGT_0891 YP_003462710.1 transcriptional regulator CP001918.1.gene3444. Protein 1e-39 43
DehalGT_0891 YP_003462710.1 transcriptional regulator CP000647.1.gene2531. Protein 6e-40 43
DehalGT_0891 YP_003462710.1 transcriptional regulator CP000675.2.gene1535. Protein 1e-41 42
DehalGT_0891 YP_003462710.1 transcriptional regulator DQ212986.1.gene4.p01 Protein 1e-36 42
DehalGT_0891 YP_003462710.1 transcriptional regulator AE015929.1.gene1106. Protein 2e-27 41
DehalGT_0891 YP_003462710.1 transcriptional regulator EU250284.1.orf4.gene Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DehalGT_0891 YP_003462710.1 transcriptional regulator VFG1563 Protein 7e-35 42
DehalGT_0891 YP_003462710.1 transcriptional regulator VFG1702 Protein 8e-36 42