Gene Information

Name : DehalGT_0613 (DehalGT_0613)
Accession : YP_003462436.1
Strain : Dehalococcoides sp. GT
Genome accession: NC_013890
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 578046 - 578969 bp
Length : 924 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase; KEGG: det:DET0716 tyrosine recombinase XerC

DNA sequence :
ATGCAGGAGAATTTTAACAAATACCTTGAATATCTATCGGTAGAAAAAAACGTTTCACCTTATACCCTTAGAAACTACCG
CACAGATTTAATTGGTTTTGTTAATTACCTGATTGAAAAAAAAGTAAGCTCTTTTGACAGGGTTGACCGCTATATCCTGA
GGGATTACATGTCAAGCCTGATAGCCAAAGGAATTGTAAAGGGCAGTATTGCCCGTAAACTTTCGGCAGTACGTTCATTT
TACCGTTATCTTATGCGGGAAGGCCTTATTCAAAAAAACCCCACCTTAAATGCCTCCAGCCCCCGTCTGGACAAACGCCT
GCCGGAGTTTCTGACCGTAACCGAGGTTAACAAACTTCTGCGGGTGCCAGATTCGTCCACCCCCCAAGGACTACGTGACA
AAGCTTTTATGGAACTCCTTTACGCCAGCGGCCTGCGTGTCAGCGAGCTGGTTAAACTGGATATAGAAAATATGGACCTG
CACAGCCACCAGATACGTGTTTGGGGTAAAGGGTCTAAAGAACGCGTAGTTCTAGCGGGCTTACCTGCCATCCAGTCCAT
TCAAAACTATCTCAATCTAGGCAGACCTTTGCTAAAAGGCAAGCGGAATACCCCGGCCTTATTCCTGAACCCAACCGGCG
GCAGACTGAGCGCCCGCAGTTTTCAGGAAAGGCTGGATAAACTGGCCAAACAGGCAGGCATTGAAAAACACGTCCATCCC
CATATGCTGCGCCACACTTTTGCTACTCACCTGCTGGACGGAGGAGCAGACCTTCGGGTGGTACAGGAACTTCTGGGGCA
CTCTAATCTTTCCACTACCCAGATATATACCCATGTTACCAAAAGCCAAGCCCGTAAAGTCTACATGTCCAGTCATCCGC
TGGCCAGACCACAGAATAATATCGCCGGGAGGGAAGACGAATGA

Protein sequence :
MQENFNKYLEYLSVEKNVSPYTLRNYRTDLIGFVNYLIEKKVSSFDRVDRYILRDYMSSLIAKGIVKGSIARKLSAVRSF
YRYLMREGLIQKNPTLNASSPRLDKRLPEFLTVTEVNKLLRVPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENMDL
HSHQIRVWGKGSKERVVLAGLPAIQSIQNYLNLGRPLLKGKRNTPALFLNPTGGRLSARSFQERLDKLAKQAGIEKHVHP
HMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQIYTHVTKSQARKVYMSSHPLARPQNNIAGREDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-42 43
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-42 43