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Name : DehalGT_0578 (DehalGT_0578) Accession : YP_003462401.1 Strain : Dehalococcoides sp. GT Genome accession: NC_013890 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 541644 - 543644 bp Length : 2001 bp Strand : - Note : KEGG: det:DET0678 transketolase; TIGRFAM: transketolase; PFAM: transketolase; transketolase domain protein; SMART: transketolase DNA sequence : ATGTCAAATACGAAATTAGATAGTTTATGCATAAACGCCCTTCGCTTTCTTTCGGTAGACGCTGTTCAGAAGGCAAATTC GGGGCATCCCGGAGCGCCTATGGGTATGGCCGCTATGGCATATGCCCTGTGGCAAAATTTTCTCAAGCATAACCCGCAGG ACCCCGCTTGGCCTAACCGTGACCGTTTTATACTTTCAGCCGGCCATGCCTCTGCCCTGCTTTATTCACTACTCCACCTG ACCGGTTATGACCTGCCGCTGGACGAACTTAAAAATTTCCGCCAGTGGGGCAGTAAAACACCGGGACATCCGGAATACGG CCTGACTCCCGGGGTTGAAATGACTACCGGCCCGCTTGGGCAGGGTTTTGCAAGCGGTGTGGGTATGGCTATGGCCGAAG CTCATTTGGCAGCGGTTTTTAACCAGCCGGATTGCAAAATTATAGACCATTATACCTACGGCATAGTCTCTGACGGAGAC CTGATGGAAGGCGTAGCTTCAGAAGCGGCCTCTCTGGCCGGGCATTTAGCCCTTGGCAAGCTGATTTATCTGTATGATGA CAATGATATATCTATTGAAGGTTCAACTGAGCTGGCTTTTACCGAAAACGCAGCTCTGCGCTTTGAAAGTTACGGCTGGC AGGTTATAGACCATGTAGACGGGCTTGACCCGGAGGCGGTATCTCAGGCTATTAAACAAGCCCAGTCAGATACCACCCGC CCCAGCCTGATTATCTGCAAAACAATCATCGGCTTTGGCAGCCCGAATAAGGCCGGCAAGGCCTCTGCCCATGGCGAGCC GCTGGGAACAGATGAGGTATCCAAGAGCCGTAAATCTCTGGGGTGGGACTATGAACCGTTTGTAATACCAGTTGAGGCTC TAACAGAGTTCCGCGAAGCACTGGGCAAGGGCAAAACAGCCCAGCAGGTTTGGTTGTCCAAGCTGGACTACTATTTAAGC CATTATCCCGAAAAAGCCTCACTGCTGCAGGACATGCTTTCGGGCAACTTACCTGAAGACTGGGACAAAGATCTGGATAG ACTCTTTGACAAAGCTATGTCAAGCCGCGAGGCTTCAGGCCTGCTGATAAATGCCTTGGCTTCCCGCCTGCCTTCTCTCA TGGGTGGTTCGGCAGACCTCAGCCCGTCTAACAAGACCGTTATCAAAGACGGCGGGGAATACGAACCTCACTATTACGAG GGACGGAATATCCATTTCGGAGTGAGGGAGCACGCCATGGGGGCAATAGCTAACGGACTGGCTCTCCACGGGGGCATAAT ACCTTACGTTGCCACTTTCCTCATATTTTATGACTACATGCGTCCGGCTGTACGGTTGGCTTCACTTATGGGGCAAAGGG TGATTTATATTTTTACCCATGATTCCATCGGTCTGGGAGAAGACGGCCCTACCCACCAACCCATTGAACAGCTGGCCGGT CTGCGTTCGGTACCCGGTCTGGTTACTATCCGTCCGGCAGATTCATATGAGACTGCTCAGGCATGGAAAACGGCTATACT CCGTAAGAACGGCCCTACCGCCATTGCCCTGTCCCGTCAGAAACTGCCGCTTTTAGATAACTCTCAGACAAAATCCTTAA ACCTGCCTAAAGGGGCATATATACTGCAGGAAACAGACTCCCACCCGCAGGTAGCTCTAGTTGCCAGCGGGTCTGAAGTA ACTATAGCGGTTGAAGCGGCTGAAATACTTAAGGGGAAAGGCATATCCTCAAGGGTAGTATCTTTCCCTTCATGGCAGCT TTTTGATAACCAACCCCAAACCTACCGCCAGAGTGTCCTGCCTTCTTCCCTGCCACGGGTAATAATGGAAGCTGGCAACT CACAGGGCTGGTGCAAATATCTGGGTACAAACGGAACTGTTATATCAATTGACCACTTCGGGGCATCAGCCCCGGCAGCC CTGCTTTACAAAAACTTCGGCCTGACCCCTGAAAACATGGCTGAAAAAGCTTTAAAGCTTTTGGAGAATGAACATGAGTA A Protein sequence : MSNTKLDSLCINALRFLSVDAVQKANSGHPGAPMGMAAMAYALWQNFLKHNPQDPAWPNRDRFILSAGHASALLYSLLHL TGYDLPLDELKNFRQWGSKTPGHPEYGLTPGVEMTTGPLGQGFASGVGMAMAEAHLAAVFNQPDCKIIDHYTYGIVSDGD LMEGVASEAASLAGHLALGKLIYLYDDNDISIEGSTELAFTENAALRFESYGWQVIDHVDGLDPEAVSQAIKQAQSDTTR PSLIICKTIIGFGSPNKAGKASAHGEPLGTDEVSKSRKSLGWDYEPFVIPVEALTEFREALGKGKTAQQVWLSKLDYYLS HYPEKASLLQDMLSGNLPEDWDKDLDRLFDKAMSSREASGLLINALASRLPSLMGGSADLSPSNKTVIKDGGEYEPHYYE GRNIHFGVREHAMGAIANGLALHGGIIPYVATFLIFYDYMRPAVRLASLMGQRVIYIFTHDSIGLGEDGPTHQPIEQLAG LRSVPGLVTIRPADSYETAQAWKTAILRKNGPTAIALSRQKLPLLDNSQTKSLNLPKGAYILQETDSHPQVALVASGSEV TIAVEAAEILKGKGISSRVVSFPSWQLFDNQPQTYRQSVLPSSLPRVIMEAGNSQGWCKYLGTNGTVISIDHFGASAPAA LLYKNFGLTPENMAEKALKLLENEHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 6e-143 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 4e-136 | 51 |
