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Name : DehalGT_0054 (DehalGT_0054) Accession : YP_003461879.1 Strain : Dehalococcoides sp. GT Genome accession: NC_013890 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 50674 - 53148 bp Length : 2475 bp Strand : + Note : PFAM: ATPase AAA; Clp domain protein; ATPase AAA; Clp ATPase-like; SMART: ATPase AAA; KEGG: det:DET0057 ATP-dependent Clp protease ATP-binding subunit ClpC DNA sequence : ATGTCTAGCAGATTTGATAAATTTTCCGAAAGAGCGCGCCGGGTTCTTACCTATGCACAGGAAGAAGCCCAGAGCCTTAA CCATAACTACATCGGCACTGAGCATATACTGCTGGGGCTGGTGAGAGAAGAAGAAGGCGTGGCCGCCCGGGTGCTGGTGA ATATGGACGTAAACCTGGCCAAGGTACGTTCGGCTGTTGAATTTATACTGGGACGGGGTGAACACCCTGCCACCTCTGAA ACCGGTCTTACCTCCAGAGCCAAAAAGGTAATCGAGCTGGGTATTGATGAAGCCAGAAATCTGGGCCATAACTACATTGG CACTGAGCATTTGCTTTTAGGCCTTCTGCGTGAAGGTGAAGGAGCGGCTGCCGGTGTGCTTGAGAGTTTTGGGGTTACAG TTGAAAAGGTGCGCACCGAAGTAGGGCGTATCCTGAATCAGGGTTTAAACAAACCTAAAACCAGCCGGACAGCCCCCAGC CGAACCCCCCAGCTGGACCAGTTAGGTTTTGACCTGACGGCCGCAGCCAAGGCTGGTAAGCTTGACCCGGTTATCGGGCG TTCCAAAGAAATAGAACGGGTAGTCCAGATTCTTTCCCGCCGTACCAAAAATAACCCTGCTCTTATAGGCGAACCTGGCG TAGGAAAAACCTCTATTGTGGAGGGGCTGGCCCAGCGCATTGTTTCGGGTGACGTACCGGAAACTCTGGAACAGAAGCAT ATAATCTCACTGGACGTGGCCTCACTGGTGGCCGGTACCAAATACCGGGGTGAATTTGAGGAACGGCTTAAGAAGGTTAT TGAAGAGATTAAAAATGCAGGAAACATAATCCTGTTTATAGACGAATTCCACACCATGGTGGGAGCCGGTGCTGCCGAGG GGGCAGTAGATGCCGCCAATATCCTCAAGCCTTCACTGGCCAGAGGTGAGGTGCAGGTTATCGGTGCGACCACTCTGGAT GATTTCCGTAAGTATGTTGAGCGTGATGCCGCACTTGAGAGACGCTTCCAGCCGGTACTGGTTGAAGAACCGGCCATAGA AGATACACTGAGCATTCTCAGGGGTATAAAAGAACGCTATGAGGAGCATCATAAGCTTATCATCAGCGATGAAGCTATTA TCGCTGCTGCCAATATGGCTGCCAGATATATACCTGACCGCTTTTTGCCGGACAAGGCTATAGATTTGGTTGACGAAGCT GCATCACGGGTGCGGATAAAGAAACGCACCAAGCCGGTCTCTTTGAAAGAGATGAAAGCTATAGAAGACAGCTACCGCCG GGATAAAGAAGCCGCTCTGGCTACCCAGCAGTACGACTATGCTTCCGAACTCCGCGAGCGTGAGCTTCAGATAGCTGAAA AGATACGCCGCATGGAAGATGAATGGCAGACCGAACAGGCTATGGACAAGCCGGTGGTGGGCGAAGAAGATATTGCTCAG GTAGTCAGTATGTGGACAGGTGTCCCTCTGGTACAGCTTACCGGTGACGAAACCGAACGCCTTCTCCATATGGAAGATGC TTTGCACGAGCGGATTATCGGCCAGGAAGAGGCTATTGTTACCATATCCAAGGCTGTCAGGCGGGCACGGGCCGGTCTTA AAGATCCCCGTCACCCCATTGGCAACTTTGTTTTCCTTGGACCTACCGGCGTGGGTAAAACCGAATTGGCACGGGCGCTT GCCCAGTTTATGTTCGGTTCGGAAGACTCTTTGGTTCGGCTGGATATGTCCGAATTTATGGAAAAATTCGCTGTATCCCG TCTGGTGGGTGCACCCCCCGGATATGTGGGCTATGATGAGGGCGGCCAGCTGACGGAAGCTGTTCGCCGCAAGTCATATT GCCTGATACTGCTGGACGAAATAGAAAAAGCTCATCCTGACGTTTTTAATATTCTCCTTCAGATATTTGATGACGGCCAC CTGACAGATGCCAAGGGCAGGCGGGTGGACTTCAGGAATACCATTATCATCATGACCTCAAACATTGGGGCTGAACTTAT CCGCAAGGGTAGCGGGACTATCGGATTTGCCACTCAGACAGACGAATCAAAGGCCCAGCAGACCAATTTTGAGCACATGA AAGACAAGCTGCTGGGTGAGCTTAAAAAGAGTTTCCGTCCGGAGTTTTTAAACCGTATTGACAGTGTGGTGGTCTTCCAC TCGCTAAATAAAGAGCAGATTCGCAGTATTGTTGACCTGATGCTCAAGAGTGTGGTCAAGCAGATGGCTGAAAAGGGCAT CGGGCTTGAGGTGACCGAATCTGCCAAGGACTTGCTGGGCAAGAAGGGTTATGATGAGGTTTATGGTGCCAGACCTCTAC GCCGCACTATCCAGACCATGATAGAAGACCGCTTGTCTGAAGACTTGCTGCGGGCTAAATTTAAAGCCGGGGATAAAGTA ATAGTGGATACTGCCGAAGACGAAATAATTGTCCGGCTGGCCGAACCGGCTGAGCTTAGTCAGGCTACTCCTTAA Protein sequence : MSSRFDKFSERARRVLTYAQEEAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMDVNLAKVRSAVEFILGRGEHPATSE TGLTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGEGAAAGVLESFGVTVEKVRTEVGRILNQGLNKPKTSRTAPS RTPQLDQLGFDLTAAAKAGKLDPVIGRSKEIERVVQILSRRTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKH IISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGATTLD DFRKYVERDAALERRFQPVLVEEPAIEDTLSILRGIKERYEEHHKLIISDEAIIAAANMAARYIPDRFLPDKAIDLVDEA ASRVRIKKRTKPVSLKEMKAIEDSYRRDKEAALATQQYDYASELRERELQIAEKIRRMEDEWQTEQAMDKPVVGEEDIAQ VVSMWTGVPLVQLTGDETERLLHMEDALHERIIGQEEAIVTISKAVRRARAGLKDPRHPIGNFVFLGPTGVGKTELARAL AQFMFGSEDSLVRLDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKSYCLILLDEIEKAHPDVFNILLQIFDDGH LTDAKGRRVDFRNTIIIMTSNIGAELIRKGSGTIGFATQTDESKAQQTNFEHMKDKLLGELKKSFRPEFLNRIDSVVVFH SLNKEQIRSIVDLMLKSVVKQMAEKGIGLEVTESAKDLLGKKGYDEVYGARPLRRTIQTMIEDRLSEDLLRAKFKAGDKV IVDTAEDEIIVRLAEPAELSQATP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DehalGT_0054 | YP_003461879.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 57 |
| DehalGT_0054 | YP_003461879.1 | ATPase AAA | VFG0080 | Protein | 1e-148 | 51 |
