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Name : DehalGT_0514 (DehalGT_0514) Accession : YP_003462337.1 Strain : Dehalococcoides sp. GT Genome accession: NC_013890 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 476506 - 478002 bp Length : 1497 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: det:DET0578 lysyl-tRNA synthetase DNA sequence : ATGCCGGAAGAATATTTAAACGCTCAAAAGATGGAAAAACTTGAACGGATAAAGAGCCGGGGTATCAACCCTTATCCGTC CACTTTTCATCCCAGCCATACCAGCGCACAGGCAGTTGCTTTGCTGGTTGAGATTGAAACACAGGAAAATCATCTGAAGG AAGTCCTTAAGCTTGCCGGACGGATAATGACCCGCCGTGATATGGGCAAGATTTCCTTTATGGATATACGTGACGGCAGT GGTAAAATGCAGATTTTTTTCCGTCAGAATGACCTTGACGAAGCCAGTATAGAACTGCTTAAAGACTTGGATTTGGGTGA TTTTATCGGGGTAGAGGGTAGCCTGATGCGTACCCGCACTGGTGAGCCCAGTCTGGCTGCTACCAAAGTAAGTATGCTTT CAAAATCACTCCTGCCTCTGCCTGAGAAATGGCACGGCCTGCAAGATGTAGAGAAACGCTACCGCCAGCGTTACCTTGAC CTGATTTCCAACGCAGATGCCCGCCAGACCTTCCTGACCCGCAGCCGGGTTATCAGTGTTATACGTGCCTTTATGAATGC TAAAGGGTTTCTGGAAGTAGAAACACCTGTTCTTCAGCCTGAGGCAGGCGGGGCACTTGCACGCCCGTTTATTACCCATC ATCAGGCTTTGAACTGTGATTTTTATATGCGAATAGCTCTGGAACTGCACCTGAAAAGGCTGATAGTGGGCGGTTTTGAC CGGGTGTATGAAATTGGGCGTATTTTCCGTAACGAAGGCATCTCCACCAGGCATAACCCCGAATTTACCATGATGGAAAG CTACCAGGCTTACGCTAACTATAAAGACGTTATGGATTTTCTTGAGGAAATGGTTTCAAGCGTGGTCAAAGAGATTAGCG GTGGATACACCCTGCCGTTTGGAGATATTACCCTGGACTTTACTCCCCCGTGGCCCCGCCTGACCATGCGTGATGCTGTA AAACAATATGCCGGCATAGACTTTTTTGATTTCCCCACCAAAGAAACACTGGCAGCAGAAATGACCCGCCGCAAACTCAA AGTAGATCCCGCCAAAGACTGGGGGAAACTGGTAGATGAGCTGGTAGGTGAATTTGTAGAACCCCACCTTGTTCAACCCA CTTTCCTTACTGACCACCCTGTGGCCATGTCTCCCCTTGCCAAACAGAAACCGGAAGACCCTCGCCTGACAGAGCGGTTT GAGGCCATCTGCGCAAATATGGAAATAGCCAACGCTTTTTCCGAACTGAATGACCCGGTAGAGCAAAGGGCACGTTTTAA AGAACAGCTTGAAAAACGCAGTCAGCTACGCACGGACGAATCTGAAAGCGTGGATGAAGACTTTTTGGCCGCTCTGGCAT ACGGAATGCCGCCCACCGGCGGTCTGGGTGTGGGTATTGACCGTCTGGTGATGCTCTTTACCAACCATGACTCTATCCGC GAGGTTATTCTATTTCCTGCCCTGAAGGACCGGGAAGACACTAAAACACAGGAATAA Protein sequence : MPEEYLNAQKMEKLERIKSRGINPYPSTFHPSHTSAQAVALLVEIETQENHLKEVLKLAGRIMTRRDMGKISFMDIRDGS GKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSLMRTRTGEPSLAATKVSMLSKSLLPLPEKWHGLQDVEKRYRQRYLD LISNADARQTFLTRSRVISVIRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQALNCDFYMRIALELHLKRLIVGGFD RVYEIGRIFRNEGISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAV KQYAGIDFFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDELVGEFVEPHLVQPTFLTDHPVAMSPLAKQKPEDPRLTERF EAICANMEIANAFSELNDPVEQRARFKEQLEKRSQLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIR EVILFPALKDREDTKTQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-109 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DehalGT_0514 | YP_003462337.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-109 | 47 |
