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Name : DehalGT_0513 (DehalGT_0513) Accession : YP_003462336.1 Strain : Dehalococcoides sp. GT Genome accession: NC_013890 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 475233 - 476474 bp Length : 1242 bp Strand : - Note : KEGG: det:DET0577 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTTGATTTGAAATTTATAAGAGAAAATCCTGAACTGGTACGCAAGGCAGTGGCAGACCGGAATACCGATGCCCCCAT TGATGAAATACTGGAACTGGATAACAGCCGCCGTAACCTCACTCAGGAATTGGATAACCTTCGTGCCAAACGCAAAATAA TGGCCAAACAGAGGGATGAGACCGCCATTGAAGAGGGGCGGGTTTTACGCGGGCAGATAAGTACACTTGAGTCCGAACTT TCACAGGTAGATGAAAAGCTGACTGACCGATTGCTCAGAGTACCCAATATTCCTGACCCGTCTGTGCCTGTTGGCAAAGA TGAAAGCGAAAATGTAGTCCTTTATTACAGGGGAGAAAAACGCAATTTCAGTTTCACTCCCAAACCTCATTGGGAACTGG GTGAAGCCCTGGATATTATAGACTTTGACCGGGGTATCAAACTTTCGGGTTCACGTTTCTATATCTTGAAAGGCGCGGGT GCCCGCCTTCAAAGAGCCCTTATTGCCTTTATGTTAGACCTGCATACCCGAAAGCATGATTATACCGAGATCTACCCCCC CTATATGATAAAAAGAGAGTGTCTGGTAGCTTCGGGCAACCTGCCCAAATTTGCTGACAATCTCTATCATGACGCAGAGG AAGACTACTGGTGGGTGCCTACCGCTGAAGCCCCCTTAACCAATCTGCACCGTGATGAAATACTCTCCGCAGAGCAGTTG CCCATTCATTATGTAGCCTACACCGCCTGTTTCCGCCGTGAGAAAATGTCCGCCGGCAAGGATGTACGCGGCATTAAGCG GCTGCATCAGTTTGACAAGGTTGAACTCTATAAATACTGCAAACCGGAAGATTCTTTTGCCGAACTGGAAAAGATGGTGG CAGATGCGGAAGAAATAGCAGACGCCCTCAAAATACCCTACCGCCTTAAACAGCTGGTCACCGCTGATATAAGCTTCGGT TCAGCCAAGTCTTATGATATTGAAATGTATTCACCCGGAGTTGACGAATGGCTGGAGGTTTCATCCTGTTCCAACTGCAC AGACTTTCAGGGCAGGCGGGCTAATGTCCGCTTCCGCCGCACCTCCGAAGCCAAACCCGAATTCGTCCACACCCTGAACG GCTCCGGTCTGGCCTTGCCCAGAGTGATGATATCGGTTATAGAAAACTATCAGCAACCGGACGGAAGCATTGTAATTCCT GAAGTACTCCGCCCGTTTATGGGAGTGGACGTTATCCGCTAG Protein sequence : MLDLKFIRENPELVRKAVADRNTDAPIDEILELDNSRRNLTQELDNLRAKRKIMAKQRDETAIEEGRVLRGQISTLESEL SQVDEKLTDRLLRVPNIPDPSVPVGKDESENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAG ARLQRALIAFMLDLHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSAEQL PIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFAELEKMVADAEEIADALKIPYRLKQLVTADISFG SAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTSEAKPEFVHTLNGSGLALPRVMISVIENYQQPDGSIVIP EVLRPFMGVDVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-93 | 46 |
