Gene Information

Name : DehalGT_0324 (DehalGT_0324)
Accession : YP_003462147.1
Strain : Dehalococcoides sp. GT
Genome accession: NC_013890
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 308596 - 309477 bp
Length : 882 bp
Strand : -
Note : TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; KEGG: det:DET0380 pyridoxal biosynthesis lyase PdxS

DNA sequence : 
ATGGAAACCGGTACTTTCAAAGTAAAATCTGGCCTGGCCCAAATGCTGAAGGGCGGGGTAATTATGGATGTAACTACCCC
CGAACAGGCTAAAATAGCAGAAGAAGCAGGTGCCTGTGCCGTTATGGCACTGGAACGCGTACCTTCGGATATCAGAGCGG
CCGGCGGGGTAGCCCGCATGGCAGACCCCACTATTATAGAGCAGATTATGAAAGTAGTCAGCATACCCGTTATGGCCAAG
TGCCGTATCGGCCATTTTGTGGAAGCCCAAATACTGGAATCCATGGGGGTGGACTATATTGACGAGTCCGAAGTGCTTAC
CCCGGCTGACGAAAATTTCCACGTCTGGAAACATGACTTTAAAGTCCCCTTCGTCTGCGGCTGCCGTGATCTGGGCGAAG
CCCTAAGGCGGATTGGCGAGGGTGCGGCTATGATACGCACCAAAGGCGAAGCCGGTACCGGCAACATTGTGGAAGCGGTA
AGGCATATGCGTTCCGTTATGGGCTCTGTCAGAAGGGTACAGTCCATGTCACCTGACGAATTGTCCGCTTATGCCAAAGA
GATAAATGCACCTCTGGAACTGGTGCTTGAACTTCATAAGACCGGCAAACTGCCGGTAGTGAACTTTGCCGCCGGCGGAG
TAGCTACCCCGGCCGATGCGGCCTTGATGATGCAACTGGGGGCTGACGGGGTATTTGTGGGCTCAGGTATATTTAAATCA
TCAAACCCCTCGGCCATGGCCAAAGCAGTAGTAAAGGCTGTGACCCACTATAAAGATGCCCAAATACTGGCTGAGATATC
CAAGGGTCTGGGTGATGCCATGCCCGGTCTGGATATTAAACAGATAGATCCCGATAAACTTATTTCCCAGCGGGGTTGGT
AA

Protein sequence : 
METGTFKVKSGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVARMADPTIIEQIMKVVSIPVMAK
CRIGHFVEAQILESMGVDYIDESEVLTPADENFHVWKHDFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNIVEAV
RHMRSVMGSVRRVQSMSPDELSAYAKEINAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS
SNPSAMAKAVVKAVTHYKDAQILAEISKGLGDAMPGLDIKQIDPDKLISQRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-85 67
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-85 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-85 66