Gene Information

Name : DehalGT_1074 (DehalGT_1074)
Accession : YP_003462890.1
Strain : Dehalococcoides sp. GT
Genome accession: NC_013890
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1017816 - 1018025 bp
Length : 210 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: det:DET1338 DNA-binding protein

DNA sequence :
ATGCAAAATAAACTTAAGGTGTTAAGAGCTATAAACAGCCTCACTCAGGAAGAACTGGCAGACAAACTGGGCATTACCCG
CCAGACAGTTATTTCTATAGAACGGGGTAAGTATTCCCCTTCTCTGGAGCTGGCTTTCAAAATAGCCTCCCTTTTTGAAA
CACCTATAGAAGAAATTTTTGTATATAACACTGAACAGGAAGGGCAATGA

Protein sequence :
MQNKLKVLRAINSLTQEELADKLGITRQTVISIERGKYSPSLELAFKIASLFETPIEEIFVYNTEQEGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-10 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-10 48
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DehalGT_1074 YP_003462890.1 XRE family transcriptional regulator VFG2175 Protein 1e-10 48
DehalGT_1074 YP_003462890.1 XRE family transcriptional regulator VFG2168 Protein 1e-10 48