Gene Information

Name : DehalGT_0998 (DehalGT_0998)
Accession : YP_003462815.1
Strain : Dehalococcoides sp. GT
Genome accession: NC_013890
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 952951 - 954336 bp
Length : 1386 bp
Strand : +
Note : TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: det:DET1261 argininosuccinate lyase

DNA sequence :
ATGAGCCATATCCGAAGCCGCTTTTCAAAACCGGCAGATGAACTGGTGGTCAGATATACCACCTCTCTGCCCTTTGACTG
GCGTTTATACAAAGAAGATATAAAATGCTCAACCGCCCATGCCCGCATGCTTTCAAAACAGGGCATTATTTCGACTGAAG
ACAGCCAGTCCATAATAAACGGGCTGAATGCTATCCTCACCGAAATAGAAACAGGCAGTTTCGTATTTAAACCCGAAATG
GAAGATATCCACATGGCCATAGAGGGGCGTCTTTTTGAGCTTATTGGCGAAGCGGCCGGCAGACTGCACACCGCCCGCAG
CCGAAACGATCAGGTAGCAACAGATGTACACCTTTTTGTCAAAAATGCCTGTGATAAAACTATTAATAAAATACGCACCC
TTCAGGGAACTTTGCTGGAACAGGCGGAAGCACACCCGCAGACTGCCCTGCCTGGTTATACCCATATGCAAATAGCCCAG
CCGGTGCTTCTTCCCCACCACCTGCTGGCTTACTTTGAAATGCTGGAACGTGACTGCGGGCGTTTTACAGATGCCCGAAA
ACGGGCGGATGTAATGCCGCTTGGCAGCGGGGCTCTGGCAGGTGTACCCTACCCGCTTGACCGCGAAATGGTGGCCAAAG
AACTGGGTTTTTCGGCTATCAGTCAAAACTCGCTGGATGCGGTTTCAGAGCGGGACTTTATACTGGAATACCTTTCAGAC
GCCGCAATATGCCAGATGCACCTCTCCAGACTGAGTGAAGAGATGGTGATATGGTCTTCGTCTGAATACGCCTTTGTAGA
GCTTGATGACGCCTATACCACCGGCTCAAGCATTATGCCCCAAAAGAAAAACCCGGACGTGGCCGAACTCTGCCGCGGCA
AGACCGGGCGGGTATACGGCTCTCTGAATACCATACTGACCGTCATGAAGGGGTTGCCTCTTTCCTATAACCGAGACCTG
CAGGAAGATAAAGAACCCCTGTTTGACTGTGTGGACACTCTGGGGGACAGCCTTGAAGTATTTGCCGGTATGATAAAAAC
CGCCAAGTTCAAGCCTGAACGTATGCTTCGGGCTTTGGAAAAGGGTTATGTTCTGGCAACTGATATTGCCGATTATCTGG
TGGGCAAAGGCGAAAGTTTCCGTAACTCACACGGCATTGTGGCACGGCTGGTGAGCTATGCTGTCGCTCAAAATAAAACC
TTTGGTGAGCTCAGCCTTGCGGAATACCGCCAGTTTTCAAACCTGTTTGAAAAAGATATTTATGCTGTAGATATAAAGTC
AGCCCTAAATGCCCGCAACCTGCCCGGCGGAACTGCACCAAAACAAATAGCCCAGGCAATTGCCCGGGCTAAGAAAATAC
TTGCTGAAGCTGGAGTTAAAAACTAA

Protein sequence :
MSHIRSRFSKPADELVVRYTTSLPFDWRLYKEDIKCSTAHARMLSKQGIISTEDSQSIINGLNAILTEIETGSFVFKPEM
EDIHMAIEGRLFELIGEAAGRLHTARSRNDQVATDVHLFVKNACDKTINKIRTLQGTLLEQAEAHPQTALPGYTHMQIAQ
PVLLPHHLLAYFEMLERDCGRFTDARKRADVMPLGSGALAGVPYPLDREMVAKELGFSAISQNSLDAVSERDFILEYLSD
AAICQMHLSRLSEEMVIWSSSEYAFVELDDAYTTGSSIMPQKKNPDVAELCRGKTGRVYGSLNTILTVMKGLPLSYNRDL
QEDKEPLFDCVDTLGDSLEVFAGMIKTAKFKPERMLRALEKGYVLATDIADYLVGKGESFRNSHGIVARLVSYAVAQNKT
FGELSLAEYRQFSNLFEKDIYAVDIKSALNARNLPGGTAPKQIAQAIARAKKILAEAGVKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 2e-108 51
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 2e-108 51