Gene Information

Name : DehalGT_0980 (DehalGT_0980)
Accession : YP_003462797.1
Strain : Dehalococcoides sp. GT
Genome accession: NC_013890
Putative virulence/resistance : Resistance
Product : arsenic resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 939460 - 940524 bp
Length : 1065 bp
Strand : +
Note : TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: afu:AF0475 hypothetical protein

DNA sequence :
TTGCCATCAAATGAAATAGCAAATAAGCTGCCCCTGCTTGACCGGTTTCTGACACTCTGGATATTTCTGGCCATGCTTGG
AGGCATTGGTCTGGGGTATTTTGTACCCCAGACTTCAGATATTATCACTTCGTTTCAAATCGGCACTACTTCAATACCAA
TTGCTGTCGGCCTTATTCTTATGATGTTCCCACCTCTGACCAGAGTCCGATATGAAAAAATCCCTCTGGTTTTTAAAGAT
TTGAAGTTCCTTAGCTTTTCATTGCTCTTAAACTGGGTGATTGGGCCTATGCTGATGTTTGGGCTGGCACTCCTCTTCCT
TCGTGATTACCCCGAATACATGATTGGCATTATTATGGTTGGGCTAGCCAGATGCATCGCTATGGTAATTGTGTGGAATG
AGCTGGCAAAAGGTGACCGTGAATATGCAGTGGGGCTGGTGGGTATAAATGCTATTTTCCAGGTACTTTTTTACTCGGTT
TATATATATTTCTTCATTACCTTTCTTTTGGGGAAAATGGGACTGGCAGATGGTCTGGATATTGAACTTTCTATAGCTCA
AGCAGCTAAAACTGTTTTCATTTATCTTGGAATACCTTTCTTACTGGGGGTTATCACCCGTTATAGCCTGCTGGCAATTA
AAGGCAAAGACTGGTTTGAAAATCGTTTCATACCCAGGTTTAGCCTGATTACTCCTATCGCCCTTTTATTCACCATTGTA
ATCATGTTTTCCCTGAAGGGAGAATACATCGTTGAACTGCCTCTGCATGTACTGCGAATAGCTATCCCACTGGTATTATA
TTTTGGAATAATGTGGTTCGGAGCATTTTTTGTCAGTAAAAAATTGAATGCCGGCTACCAAAAAACAGCCACCGTAGCAT
TCACCGCCAGCTCAAATGATTTTGAATTGGCTATCGCAGTAGCTATTGCCTTGTTCGGGTTGAATTCCGGTGAAGCATTT
GCATCCGTCATAGGTCCGCTTATAGAAGTGCCGGCTCTGATTTTATTGGTAAATGCCTCATTGCGTCTAAAAAAGAGATT
CCTCTCCGAAGCACCCACTGCTTAA

Protein sequence :
MPSNEIANKLPLLDRFLTLWIFLAMLGGIGLGYFVPQTSDIITSFQIGTTSIPIAVGLILMMFPPLTRVRYEKIPLVFKD
LKFLSFSLLLNWVIGPMLMFGLALLFLRDYPEYMIGIIMVGLARCIAMVIVWNELAKGDREYAVGLVGINAIFQVLFYSV
YIYFFITFLLGKMGLADGLDIELSIAQAAKTVFIYLGIPFLLGVITRYSLLAIKGKDWFENRFIPRFSLITPIALLFTIV
IMFSLKGEYIVELPLHVLRIAIPLVLYFGIMWFGAFFVSKKLNAGYQKTATVAFTASSNDFELAIAVAIALFGLNSGEAF
ASVIGPLIEVPALILLVNASLRLKKRFLSEAPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 8e-67 55
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 4e-86 55
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 3e-86 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DehalGT_0980 YP_003462797.1 arsenic resistance protein BAC0573 Protein 2e-95 58
DehalGT_0980 YP_003462797.1 arsenic resistance protein BAC0004 Protein 1e-74 52