|
Name : TK90_0611 (TK90_0611) Accession : YP_003459862.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 648337 - 649626 bp Length : 1290 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: hna:Hneap_0232 nucleotide sugar dehydrogenase DNA sequence : ATGGCGGAATTTGCGGCACCGGACGCCCCGCGTCTGGCCATAATTGGTCTGGGTTATGTCGGCCTGCCCCTGGCAGCCGA GTTCGGACGGGTCCTTCCCACGCTGGGCTTCGATATCGATACGGGCCGCGTCGAGGAACTGCGCGGCGGACACGACCGCA CACGCGAGGTCTCCCGCGAGGAACTCGCCGCCGCCGAGCATCTGGAACTGACCGCGGATCCGGGGCGACTGCAGGACTGC AACGTGTTCATCGTGACGGTGCCCACCCCGATCGATGCCCACCGGCGGCCGGACCTGGGCCCGCTGCTGGCGGCCAGCCG CACGGTGGGTCGCGCCCTGAAGCCAGGGGACGTGGTGATCTACGAGTCCACCGTCTACCCCGGCGCGACCGAGGAAGACT GTGCCCCTGTGCTGGCCACGGAATCCGGCCTCGAGCTCAACCGCGATTTTTTCCTCGGCTACAGCCCCGAGCGGGTGAAC CCCGGCGACAAGGAACACCGCATTCCCGATATCGTCAAGGTCACCTCCGGCTCCACCCCCGAGGTCGCAGAATTCGTCAA CGCGCTCTATGCCCGCATCATCCGCGCCGGCACCCACCCGGCTGCCAGTATTCGCGTAGCCGAGGCGGCCAAGGTGATCG AGAACACCCAGCGCGACGTGAACATCGCCCTGATCAACGAACTCGCGATGCTGTTCGAACGCCTGGACCTGGATACCGAG GCCGTGCTGGCCGCGGCCGGGACCAAGTGGAACTTTCTGCCATTCCGACCCGGCCTGGTGGGCGGGCACTGCATTGGCGT CGACCCGTACTACCTGACGCACAAGGCACAGGCCGCTAACTACCACCCGGAGATGATCCTCGCCGGCCGCCGCACCAACG ACGGCATGGGCGGCTACATCGCGGATCGCACGATCAAGTCGATGATCCGCAAAGGGTTCCCGGTCGTGGCCTCGCGTGTC CTGGTGATGGGGCTCGCGTTCAAGGAAAACTGCCCGGATCTGCGCAATACGCGCGTGGTGGACATCATCCATGACCTGCA CGGCTACAACGCCGAAGTCGATGTCTGGGACCCCTGGGTGGATACCGCCGAGGCCCGTCACGAGTATGGCCTGGACCTGC TGACCGAGGCGCCGAAACAGGGCCAGTACGACGCCATCATCCTTGCGGTTCCGCACCACGAGTTCGTCGAACTCGGCGCC CAGGGCCTGCAGAAATTCGGGCGCGAACGCGCGGTGATCTTCGACGTGAAATCGGTACTCCCGCCCGAGGCGAGTGACCT GCGTCTATAA Protein sequence : MAEFAAPDAPRLAIIGLGYVGLPLAAEFGRVLPTLGFDIDTGRVEELRGGHDRTREVSREELAAAEHLELTADPGRLQDC NVFIVTVPTPIDAHRRPDLGPLLAASRTVGRALKPGDVVIYESTVYPGATEEDCAPVLATESGLELNRDFFLGYSPERVN PGDKEHRIPDIVKVTSGSTPEVAEFVNALYARIIRAGTHPAASIRVAEAAKVIENTQRDVNIALINELAMLFERLDLDTE AVLAAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQAANYHPEMILAGRRTNDGMGGYIADRTIKSMIRKGFPVVASRV LVMGLAFKENCPDLRNTRVVDIIHDLHGYNAEVDVWDPWVDTAEARHEYGLDLLTEAPKQGQYDAIILAVPHHEFVELGA QGLQKFGRERAVIFDVKSVLPPEASDLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-127 | 58 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-127 | 58 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-106 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TK90_0611 | YP_003459862.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-127 | 58 |
