|
Name : TK90_0602 (TK90_0602) Accession : YP_003459853.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 636920 - 638539 bp Length : 1620 bp Strand : + Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: noc:Noc_2773 ABC transporter ATPase DNA sequence : ATGCTCGAGGTGCGCAACCTCCGCATTCGGCATCGCGACAGCGAGGCGCCGCTGGTCGAGGACATCAGCTTCTCGATCCG TGCAGGCGAGCTGTTCGCCCTGGTGGGCGAGTCGGGGTCCGGCAAGTCGATCACGGCGCTGGCGATCATGCGGCTGCTGG ACGGGGGCTTCGAGCCCTCCACGGGTGATGTCTGGCTGGCCGGGCACGGGACCCGGCAGGAACTGCTGGGCCTGCCGGAC CGCGTGATGCAGCAGGTGCGCGGGGATCGGGTGGGCATGATCTTCCAGGAACCGATGACCTCGCTGAACCCGGTGCTGAC TGTGGGCGACCAGATCGACGAGGTCCTGCGCCTGCACCGCCCGCAGATGACCCCGGCCGAGCGCGAGGCGCGGGTGCTCG AGGTGCTGCGCGAGGTCCAGCTGCCAAACCCGGAACAGCGGCGCCACGACTATCCGCACAAGCTTTCAGGGGGGCAACGT CAGCGCGTGATGATCGCGATGGCGCTGGTGGCGGAGCCGGATCTGCTGATTGCCGACGAGCCGACCACCGCGCTGGATGT GACCATACAGGCCGAGATCCTGAAGCTGATCGATCAGCTGCGCGAAAAGAACGGGATGGCTGTGCTGCTGATCACCCACG ATTTCGGCGTGGTCGCCTCGGTGGCGGATCGCGTGGCGGTGATGCACAAGGGCCGGCTGGTGGAGCAGGGCGAGTGTCAC CCGCTATTGCGCGACCCGCAGGATGCCTACACGCGCAAGCTGATCGGCGCCCTGCCGGAAAACCTGCCGCCGTTGCCCTC GGTGCCTGGGGCCGGGCGCGAGACGTTGCTGGACGTGCGCGATCTGCAGGTGCATTTTCCGGTGCTGAAGGGCCTGATGC GCCGCCAGGTGGATGTCGTGCGCGCGGTGGATGGCGTCTCGTTTCAGCTCGACAACGGCGAGGTGCTCGCGGTGGTCGGC GAGTCGGGCTGCGGCAAGACCACGCTGGGTCGCGCGATCCTGCGCCTGATCGAGCCCACTGGCGGCGAGATCCGCTACCG CGACCAGCCATTGACCGGGATGCCGCGCAAACCGTTGCGCCGCCTGCGGCGTCATTTGCAGGTGGTGTTCCAGGACCCGG CCTCATCGCTGAACCCGCGCCTGAACGTGATGACGTTGCTGACCGAGCCCATGGCGGTACACGGGATTGGCGAGGACCAG GAGGATCGCATCGAGCGTGCGCGCGCGACTCTGGACCAGGTCGCGCTACCGGCGGATACGCTGTGGCGCTATCCGCACGA GTTCTCGGGCGGCCAGCGCCAGCGCATCGGGATTGCCCGGGCCCTGGTGCTGGATCCGGACGTGATTATCTGCGATGAGG TGACCAGCGCGCTGGATGTCTCGGTGCAGGCGGAGGTCCTGCAGATCCTCGGACGATTGCGGGTCGAACGCCGCCTGGCG CTGATCTTCATCACCCACGACATGGGGGTGGTCGAGTATTTTTCCGACCGCATGCTGGTGATGCACGATGGCCGCATGGA GGAGATCGGCAACACCGCCGAGGTGCTGGCCAGTCCGCGGGCCGAATACACCCGTCACCTGCTCGAGGCGGTCCCGCGGG TTTCGCGCTACGTGCATTAA Protein sequence : MLEVRNLRIRHRDSEAPLVEDISFSIRAGELFALVGESGSGKSITALAIMRLLDGGFEPSTGDVWLAGHGTRQELLGLPD RVMQQVRGDRVGMIFQEPMTSLNPVLTVGDQIDEVLRLHRPQMTPAEREARVLEVLREVQLPNPEQRRHDYPHKLSGGQR QRVMIAMALVAEPDLLIADEPTTALDVTIQAEILKLIDQLREKNGMAVLLITHDFGVVASVADRVAVMHKGRLVEQGECH PLLRDPQDAYTRKLIGALPENLPPLPSVPGAGRETLLDVRDLQVHFPVLKGLMRRQVDVVRAVDGVSFQLDNGEVLAVVG ESGCGKTTLGRAILRLIEPTGGEIRYRDQPLTGMPRKPLRRLRRHLQVVFQDPASSLNPRLNVMTLLTEPMAVHGIGEDQ EDRIERARATLDQVALPADTLWRYPHEFSGGQRQRIGIARALVLDPDVIICDEVTSALDVSVQAEVLQILGRLRVERRLA LIFITHDMGVVEYFSDRMLVMHDGRMEEIGNTAEVLASPRAEYTRHLLEAVPRVSRYVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-85 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-85 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-85 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-85 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-89 | 42 |
