|
Name : TK90_0580 (TK90_0580) Accession : YP_003459831.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 612945 - 614510 bp Length : 1566 bp Strand : + Note : KEGG: psa:PST_4047 aerotaxis receptor Aer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HA DNA sequence : ATGCGCAAGAACCTTCCTGTTACGCAGACGGAGTATTCCCTGGAGGCCCACGGAGACCTCATCTCGGCCACCGACGAGAA AGGGCGCATCCGGTATGCCAACGACGACTTCGTCCGGGTCAGCGGTTTCGACTGCGATGAGCTGGAAGGGACGGCCCACA ACATCGTGCGCCATCCGGACATGCCGGAAGCCGCCTACGCGAACATGTGGGACACCCTGAAGGCCGACCGGGCCTGGATG GGTATCGTCAAGAACCGGCGCAAGAATGGCGACCACTACTGGGTGGATGCCTTCGTGACCCCCGCCTACGAGGACGGCCG CAAGACCGGCTACGAGTCGGTGCGCGCGATCCCCGAGCACGAGCATGTCGCCCGTGCGGAGAAGGTCTATGCCGCGATCA ACCGGGGTCGCAGCTTTGCTCGGCGCTGGTATCACGGCCTCACCTGCCGCCTCGCGGGGACGTGGCTTGTGGGTGTCCTG CTGGCGCTGGGGGTAGTGTTTCTGGTGTCTTCGCCGCTGGTCCAGGCGGGGCTTTTGCTGCTGATTTTCGCAGCTGGTGG AATTGCGTCTCTGGCGCTGACCTCCGGCATCCGGAAGGCCGTGAATCGGGCCCGCGAGCAGTTCGACAACCCGGTGATGG AGGCGATCTACACAGGACGTCGTGACGACAGCGCCTCGCTGGAACTGGTCCAGCACTTCAACGAGGCGAAGCTGCGCACG GTGCTCGGCCGCATCGAGGACAAGGCAGATGCCGTGGCCGGTGACGCACAGACAATGGCGAGCAGTGTCGAGCAGACGGC CTTGGGCGTGGAACGCCAGCAAAACGAGATCGATCAGGTCGCCACGGCGATGAACGAGATGACCTCGACCATCCAGGAGA TGGCGAGCAATTCGTCGCGCGCGGCCGAGGCCGCCAACAACGCCGAGAACGAGACCGGTGCTGGCCAGGAGGTGGTGAAC GACACGGTGTCCGTGATCAACCGCATGGCGGCCGAGGTCGAGTCCACCGCCGAGAAGCTGGGCAAGCTGGAGGCGAGCAC CGAGGAGATCGACAAGATCCTGGGTGTGATCCGCGAGATTGCCGAACAGACCAATCTGCTGGCGCTGAACGCCGCGATCG AGGCGGCCCGCGCGGGCGAACACGGCCGCGGCTTTGCGGTGGTGGCCGACGAGGTGCGCTCGCTGTCGCAGCGTACGGAC GAATCCACCGTGACCATCCGCAATATGATCGAGAGCCTGCAAAACGGTGCGCGCGAGGCGATGTCCGCGATGCGCGCCAG TCAGGAGCAGGCCGCCGATGGCGTGGAAAAGGCCCGGGCGGCAGGCGATTCGCTGTCCACCATCCGTCAGGCCGTCGCCC AGATCACCGAGATGAACACCCAGATCGCCACGGCGGTGGAGGAACAAAGCGCGGTCTCCGAGGAGATCAACCGCAACGTG ACGTCCATCCGCGATGTCGCCAGTGAAACCGGTTCGGTCTCGGTGCACGCCCGTGACGCCAGCGCGCGCATGCAGACCGA GGCCGCGGAACTCAAGGCATTGATCCAGCGTTTCGAGCAGCGGTAG Protein sequence : MRKNLPVTQTEYSLEAHGDLISATDEKGRIRYANDDFVRVSGFDCDELEGTAHNIVRHPDMPEAAYANMWDTLKADRAWM GIVKNRRKNGDHYWVDAFVTPAYEDGRKTGYESVRAIPEHEHVARAEKVYAAINRGRSFARRWYHGLTCRLAGTWLVGVL LALGVVFLVSSPLVQAGLLLLIFAAGGIASLALTSGIRKAVNRAREQFDNPVMEAIYTGRRDDSASLELVQHFNEAKLRT VLGRIEDKADAVAGDAQTMASSVEQTALGVERQQNEIDQVATAMNEMTSTIQEMASNSSRAAEAANNAENETGAGQEVVN DTVSVINRMAAEVESTAEKLGKLEASTEEIDKILGVIREIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLSQRTD ESTVTIRNMIESLQNGAREAMSAMRASQEQAADGVEKARAAGDSLSTIRQAVAQITEMNTQIATAVEEQSAVSEEINRNV TSIRDVASETGSVSVHARDASARMQTEAAELKALIQRFEQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 1e-74 | 42 |
