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Name : TK90_2543 (TK90_2543) Accession : YP_003461768.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2679659 - 2680948 bp Length : 1290 bp Strand : + Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bpt:Bpet4030 polysaccharide biosynthesis protein DNA sequence : ATGCATGCACTCCCCTCATTGGAAGAGATTCGCCTCGGGGTTATCGGACTGGGCTATGTCGGCCTGCCCCTGGCGGTCGA GTTCGGCCGGGTCTGGCCGACCCTGGGATTCGATATCCAGCCCGGACGCATCCAGGACCTGAAGAACGGGATTGATCGTA CCCGCGAGGTCGAGCCGGAGGATCTCGCTGCGGCGACGCACCTGGACTACACCACGGAGCTCGAGGCACTCCGCCCGTGC AATGTGTTCGTGGTGACCGTGCCGACGCCGATCGATGCCCACCGCCGCCCGGACCTGCGCCCCCTGCTCGGGGCCACCCA TACCGTGGGGCAGGTGCTCAAGCGCGGCGACGTGGTGATCTACGAGTCGACGGTCTATCCGGGGGCGACGGAGGAAGACT GCGTCCCGATCCTGGAACGGGAATCCGGGCTGATCCACAACGAGGACTTCTTCACCGGCTACAGTCCCGAGCGGATCAAT CCCGGGGACAAGGCGCACCGAGTCACCTCCATCAAGAAGGTCACCTCGGGCTCGCTGCCGGAGGTGGCGGACTTCGTCGA CGCCCTGTATGCGCGCGTCATCACCGCCGGCACGCACAAGGCCGAGAGTATCCGCGTGGCCGAGGCGGCCAAGGTGATCG AGAACACCCAGCGTGACGTCAACATCGCCCTGATCAACGAGCTGGCACTGCTGTTCGAGCGCCTGGGCCTCGATACCGAG GCGGTCCTGCAGGCCGCCGGGACCAAGTGGAATTTCCTGCCGTTCCGGCCCGGGCTGGTCGGCGGGCACTGCATCGGGGT GGACCCGTACTACCTGACGCACAAGGCCCAGGCCGTCGGACACCACCCGGAGATGATCCTGGCAGGGCGCCGCGTGAACG ACGCGATGGGGGCCCACATCGCGGACGCGACCATCCGTGCGCTGGTGCGCAAGGGAATCAATCCGGTGGGGACACGCATC CTGCTGATGGGCCTGACCTTCAAGGAGAACTGCCCAGACCTGCGCAATACGCGCGTGATGGACATCTACCATACGCTGCG CGGATACAACACGGAGGTCGTGGTGTTCGACCCCTGGGTCGATCCGGAGGAGGCCGAACACGAATACGGCATCACCCCGA TCACCTCGGCCCCCGAGGCGGATTCGTTCGACGCCATCATCGTGGCGGTGCCCCACCAGGCGTTCCTGGACATGGGAGTG GAAGCGATCCGTGCGCTCGCGCACCCGCAGGCGGTCCTGTTCGATGTGAAATCGGTCTTCCCGCGCGAGGCCAGCGACCT GCGCCTGTGA Protein sequence : MHALPSLEEIRLGVIGLGYVGLPLAVEFGRVWPTLGFDIQPGRIQDLKNGIDRTREVEPEDLAAATHLDYTTELEALRPC NVFVVTVPTPIDAHRRPDLRPLLGATHTVGQVLKRGDVVIYESTVYPGATEEDCVPILERESGLIHNEDFFTGYSPERIN PGDKAHRVTSIKKVTSGSLPEVADFVDALYARVITAGTHKAESIRVAEAAKVIENTQRDVNIALINELALLFERLGLDTE AVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQAVGHHPEMILAGRRVNDAMGAHIADATIRALVRKGINPVGTRI LLMGLTFKENCPDLRNTRVMDIYHTLRGYNTEVVVFDPWVDPEEAEHEYGITPITSAPEADSFDAIIVAVPHQAFLDMGV EAIRALAHPQAVLFDVKSVFPREASDLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-133 | 60 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-133 | 60 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-111 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TK90_2543 | YP_003461768.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 5e-134 | 60 |
