Gene Information

Name : TK90_2203 (TK90_2203)
Accession : YP_003461429.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine/D-glutamate ligase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0771
EC number : -
Position : 2319697 - 2321043 bp
Length : 1347 bp
Strand : -
Note : TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: noc:Noc_2863 UDP-N-acetylmuramoylalanine-D-glutamate ligase

DNA sequence :
ATGTCGAAGCCACAGCCGCACAATCTGATCGTGGGAACCGGGGTGACGGGGCAGTCCGTCGCCCGTTTTCTGCGTGCGCG
TGGCGAGACCTTTGCGATCACCGACACGCGTCGCGATCCACCGGCGCTGGCGGCCGGGGCCGACGCCGCGTGGCTGGCCG
AGGCCTGGGCCGGACCCCTGGATGGTCTCGATACTGCAGGCTACGCCCGCCTGGTCGTCTCGCCGGGGGTCCCGCTCGAA
CACCCGGCCGTCGAACAGGCCCGGGCCGCCGGCGCGGTGATTACCGGCGATATCGACCTGTTCGCTGCTGTGGCGCAGGC
CCCGGTCATTGCGATCACCGGCTCCAACGGCAAGAGCACGGTCACCGCCCTGGTGGGCGAGATCCTGACGGCCGCAGGTC
GCAAGGTCGCGATTGGCGGCAATTTTGGCACCCCGGCGCTGGATCTTCTGGACCCGGTGGTGGAGGTCTATGTGCTGGAG
CTGTCGAGTTTTCAGCTCGAACGCAGCGAGCAGCTGAAGCCGGACGGGGCCGCGATCCTGAACATCTCGCCCGACCACAT
GGATCGCTACCCGGATCTTGCCGCGTACATCCAGGCCAAGGCCCGCATCCTCGACCGCGCCGCCCGCGGTGTGCTCAACC
GCGACGATCCCTGGCTGCGCGAGTTGCCCCTGCCGGCCGGTCTGCGCGTGGTCTCGTTCGGGCTGGATGCCCCGCTGGCC
GCGACCGACTTTGGCGTGAACACGGGCGAGGCGGAGCCGGACCTGGTGCGTGGGGAGGAACGGCTGCTGTCCACCGCGCG
CCTGCGTCTGCGCGGGCAGCACAACTGGGCCAATGCCCTGGCCGCTCTGGCGCTGGCCTGGCCGTGGCTGGAATCGCTCC
AGGCGCGCAGCGAGGCGCTGGCTGCGCTAGCCGACTTCGCGGGCCTGCCGCACCGTTCGCAGTGGATCGCGCGGGTCGCC
GAGGTCGACTACATCAACGATTCCAAGGGCACCAACGTGGGCGCGACCCTGGCCGCGCTTCGGGGTACGCCGGGGCCCCT
GGTGCTGATCGCCGGTGGCCAGGGCAAGGGACAGGACTTCTCGCCGCTGGCGGACTACGTGCCCGGCAAGGTCCGGGGTG
TGGTGCTGCTCGGCGAGGATGCCCCGCTGATTGCCCGTGCCCTGGCCTCGGTGGTGCCGGTGCAGCGGGTGGACGACATG
ACCGCCGCCGTGGCGCAGGCCGCGGCCTGGGCGCAGCCCGGCGATACCGTGCTGCTGTCGCCGGGCTGCGCGAGCTTGGA
CATGTACGAGAACTATCAGGCCCGCGGCGACGACTTCGCGCGGGTTGTACGGGAGCGAGCGGCATGA

Protein sequence :
MSKPQPHNLIVGTGVTGQSVARFLRARGETFAITDTRRDPPALAAGADAAWLAEAWAGPLDGLDTAGYARLVVSPGVPLE
HPAVEQARAAGAVITGDIDLFAAVAQAPVIAITGSNGKSTVTALVGEILTAAGRKVAIGGNFGTPALDLLDPVVEVYVLE
LSSFQLERSEQLKPDGAAILNISPDHMDRYPDLAAYIQAKARILDRAARGVLNRDDPWLRELPLPAGLRVVSFGLDAPLA
ATDFGVNTGEAEPDLVRGEERLLSTARLRLRGQHNWANALAALALAWPWLESLQARSEALAALADFAGLPHRSQWIARVA
EVDYINDSKGTNVGATLAALRGTPGPLVLIAGGQGKGQDFSPLADYVPGKVRGVVLLGEDAPLIARALASVVPVQRVDDM
TAAVAQAAAWAQPGDTVLLSPGCASLDMYENYQARGDDFARVVRERAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 7e-60 42
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 7e-60 42