Gene Information

Name : TK90_2104 (TK90_2104)
Accession : YP_003461330.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2222522 - 2223427 bp
Length : 906 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: noc:Noc_2255 tyrosine recombinase XerD

DNA sequence :
GTGACCACCGCCGCGACGACCTCACCGGTCCTCGACCGCTTCCTGGACGAGCTCTGGGCGGTCGAGGGCCTCTCGGACCA
TACCCTGGCGGCCTACCGGCGCGACCTCGAGGCCCTGGCGCGCTGGCTGCATGGGCGCGGGGTTGCGCTCGAGGCAGCCA
GTAGCGCCGATCTTCTGGCGTTCGTCAGTGCCCGCATGCAGGCGGGGGCACGGCCGAAATCCATTACCCGCGCGCTGTCC
AGTATTCGTCGCTTCTATCGCTATCTGGTGCATCAGGGCGAACGCGAGGACGATCCCAGCGCCGGAATCGAATCCCCGCG
TGCCGGCCGCCCGTTGCCGGACAGCCTGTCCGAGACTCAAGTCAATGCGCTGCTGGCGGCCCCCGAGCTGCACACTGAAG
TGGGTCTGCGTGACCGCGCGATGCTCGAACTGATGTACGCCACCGGCCTGCGCGTATCCGAGCTGGTTGGGCTGGAGCAG
TCCGAGGTGAACAGCCGTCAGGGGGTGGTGCGCATCACTGGCAAGGGCGACAAGGAACGCCTGGTACCGCTGGGTGAGGA
GGCTGCCCACTGGCTGGCGCGTTATCTGCGAGAGGCACGCGGTGCACTGATGTCCGGCCATCCGCCAGTGGATACCGTGT
TCGTGACCCGGCGAGGCAGGGGGCTCACCCGTCAGGCCTTTTGGTATCGCATCAAGCACTACGCCCAAGTGGCCGGAATC
GAAGTGCCGCTGTCGCCCCATACCCTGCGCCACGCGTTCGCGACCCATCTGCTCGACCACGGCGCGGATCTGCGTGTGGT
GCAGATGCTGCTGGGCCACAGCAGCCTGTCGACCACGCAAATCTATACCCACGTCGCACGCGCCCGCCTGCAGAGCCTGC
ATGCGGAACATCATCCCCGCGGCTGA

Protein sequence :
MTTAATTSPVLDRFLDELWAVEGLSDHTLAAYRRDLEALARWLHGRGVALEAASSADLLAFVSARMQAGARPKSITRALS
SIRRFYRYLVHQGEREDDPSAGIESPRAGRPLPDSLSETQVNALLAAPELHTEVGLRDRAMLELMYATGLRVSELVGLEQ
SEVNSRQGVVRITGKGDKERLVPLGEEAAHWLARYLREARGALMSGHPPVDTVFVTRRGRGLTRQAFWYRIKHYAQVAGI
EVPLSPHTLRHAFATHLLDHGADLRVVQMLLGHSSLSTTQIYTHVARARLQSLHAEHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-66 59
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-66 59