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Name : TK90_1931 (TK90_1931) Accession : YP_003461158.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2053918 - 2055303 bp Length : 1386 bp Strand : - Note : KEGG: noc:Noc_0223 DnaB helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; SMART: ATPase AAA DNA sequence : ATGGTGCCCCCGGGCATGAACCGGCCCATGACCCCGAATCCGCGCATCCCGCCGCATTCCGAGGAGGCCGAACAGTCGGT CCTCGGCGGGCTGATGCTGGATAACGCCGCCTGGGATCGGGTGGCGGACCGCATTACCGATGAAGACTTCTATCGCCATG ACCACCGCCTGATCTACCGGGCGGTGGCCTCTCTGGCCGAACGCAATGCCCCGTTCGACATGGTTACCGTGTCCGAGCAG CTCGAGCGCACCAGTGAGCTGGAGGACGCGGGCGGCATGGCCTATCTGGGCCGCCTGGCGGCGGAGACCCCCAGTGCCGC GAATATCGTGGCCTACGCAGATATCGTCCGCGAGCGCTCCATCCTGCGGTCTCTGATCTCGGTGGGTACCGAGATCGCGG ATTCGGCGTTTGTTCCCGACGGCCGCGACTCCAAAGAACTCCTCGACCAGGCCGAGCAGAAGGTCTTCCGTATCGCCGAG CAGGGTTCGCGTGGCGCCCGGGGCTTCCGCGGCATGAAGCCGCTGCTGACCGCCGCGGTCGAGCAGATCGAATACCTCTA CGAGACGCAGAACCCGATCACCGGTGTGGCGACCGGGTATCAGGATCTGGATGCCCTGACGTCGGGACTGAACCCCGGCG ATCTGGTGATCGTCGCCGGGCGTCCGTCGATGGGCAAGACCTCGTTCGCGATGAACATCGCCGAGTACGTGGCGATGAAG AACGCCGAGCCGGTCGCGATCTTCTCCATGGAGATGCCCGGCGAGCAGCTGGCGATGCGTCTGTTGTCCTCGATGGGCCG GATCAACCAGCAGAAGCTGCGCTCCGGACGCCTGGAGGACGGCGACTGGCCGCGCCTGACCAGTGCCGTGCAGATGCTCT CCGAGGCACCGTTGTACATCGACGACACCCCGGCGCTGTCACCCACCGAGTTGCGCGCCCGTACGCGCCGCCTGATGCGC GAGCACAAGGGGCTCAAGCTGATCGTGGTCGACTACCTGCAGCTGATGCAGTCGCCCGGTAGCAGCGAGAATCGCGCCAA TGAAATCTCGGACATCTCGCGCTCGCTGAAGGCCCTGGCGAAGGAGCTGAGCGTGCCGATGATCGCGCTGTCGCAGCTCA ACCGCTCGCTGGAGCAGCGCCCGAACAAGCGCCCGGTGATGTCCGACCTGCGCGAGTCCGGGGCCATCGAACAGGACGCC GACATTATTGCCTTCGTCTACCGCGACGAGGTCTATAACGAGGAGTCCCCCGACAAGGGCACGGCCGAGATCATTATCGC CAAGCAGCGTAATGGCCCCATCGGGACCGTGCGCCTGACCTTCCGCGGACAGTTCACCCGCTTCGAGAACTATGCCCCGG ACGTCTACGGCGGGATCGAGCAATAG Protein sequence : MVPPGMNRPMTPNPRIPPHSEEAEQSVLGGLMLDNAAWDRVADRITDEDFYRHDHRLIYRAVASLAERNAPFDMVTVSEQ LERTSELEDAGGMAYLGRLAAETPSAANIVAYADIVRERSILRSLISVGTEIADSAFVPDGRDSKELLDQAEQKVFRIAE QGSRGARGFRGMKPLLTAAVEQIEYLYETQNPITGVATGYQDLDALTSGLNPGDLVIVAGRPSMGKTSFAMNIAEYVAMK NAEPVAIFSMEMPGEQLAMRLLSSMGRINQQKLRSGRLEDGDWPRLTSAVQMLSEAPLYIDDTPALSPTELRARTRRLMR EHKGLKLIVVDYLQLMQSPGSSENRANEISDISRSLKALAKELSVPMIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA DIIAFVYRDEVYNEESPDKGTAEIIIAKQRNGPIGTVRLTFRGQFTRFENYAPDVYGGIEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-111 | 54 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 7e-95 | 50 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-93 | 50 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 7e-93 | 49 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-93 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-91 | 48 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-91 | 48 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-91 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 7e-77 | 44 |
