Gene Information

Name : TK90_1642 (TK90_1642)
Accession : YP_003460873.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1761579 - 1763036 bp
Length : 1458 bp
Strand : +
Note : KEGG: sfu:Sfum_2959 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel

DNA sequence : 
ATGCCGTTTCCCGCGCAGAAGACGAAGATCGTGGCCACGATCGGCCCGGCGTCCGACTCCCCGGACACGCTACGCCGAAT
GATGCAGGCCGGGCTCAACGTGGTGCGGCTGAATTTCTCGCATGGTGACCCGGCCTACCACGCCGAGGTGATCGGACGTA
TCCGAGAGGCGGCACGGGATGCCGGCGCACGCGTTGCGATCCTGGGCGACCTGCCGGGGCCGAAGATGCGTATCGGCGAA
CTGGCCGAGGAGCCGATCGAGCTGGAGCCCGGCCAGACCATCACACTGACCACCGAGGACTGCACCGGGGATGCCTCGCG
CGTGAGCGTTTCGTTCGCCGGGCTGCCGGAGGCGGTACAGCCCGGTGATGCGCTGTTTCTGAACGATGGCTACATTGAGC
TGGAGGCGTTGTCGGTCGAGGGCCACGACGTCACCTGCCGCGTGCAGACGGGCGGGGAACTGCGCTCGCGCAAGGGCCTG
AACCTGCCGGGCATCGATCTCGGCATCCGCGCCTTTACGCTGGACGATCACGACTGGCTGCAGTTTGCGGCGGAACACGG
CGTGGATGCCGTCAGCCAGAGCTTCGTGGTCGACGGCGACGACATCCTGGCCGTGCGCAAGGCCGCGGAGGCGCTGGGCT
ACAGCCCGTTCATCGTCGCCAAGATCGAACGGGCGGCGGCGCTGGAGCAGCTCGACAGCATCCTGGAGGCGGCAGACGGC
ATCATGGTGGCGCGCGGGGATCTGGGGGTGGAGATCCCGATCGCGAGCATCGCCCTCGCCCAGCGCCGCATCACCCGGCG
CGCCAACCAGTACCACCGCCCGGTGATCACCGCGACCCAGATGCTGGAGTCCATGGTCACCTCGCGCCGCCCGACCCGTG
CCGAGGCGACCGACGTGGCCAATGCCATCCTGGGCGGCAGCGACTGCGTGATGCTCTCCGGCGAATCGGCCATGGGGCGG
TATCCGGTGGAGTCGGTGGCCATGCTCGCGGCCATTGCCCGCTCCATCGAACCGGAACGCGACCGAGGCGTGATCCCGGA
TGGCCCGAACGACCATGGCGAGGCCGGGCACGACCGCGCCGTCGACCTGATCGTGCGCAGCGTATTCCACACCGCGCAGC
GGCGTCTGCCCCAGGTGACCCTGGCGCCCACGCTCAGCGGCACCACCGCCCGACGCATTGCCTGCCTGCGCCTGCCCTGC
TGGACGGTCGCTTTCACCCCGACCCCCGCAACCGCCCAGAGCCTGCAGTTCTCCTATGGCGTCGAGCCGGTGGAAGTCAC
CGAGGACCGCAGCGACTGGAACGACTTCGCCCGGACGTGGCTCGCCGAGAACGACATCAACGACGGCCTCGCCCTCCTCA
TCCAGGGCCCCTCGGGCCCGAACCCGACCGGCAACCACCGCCTGGAACTGCTCGAACTCGACAGCCCCAGCCAGGGAGAC
GCACCAGGGCATACCTGA

Protein sequence : 
MPFPAQKTKIVATIGPASDSPDTLRRMMQAGLNVVRLNFSHGDPAYHAEVIGRIREAARDAGARVAILGDLPGPKMRIGE
LAEEPIELEPGQTITLTTEDCTGDASRVSVSFAGLPEAVQPGDALFLNDGYIELEALSVEGHDVTCRVQTGGELRSRKGL
NLPGIDLGIRAFTLDDHDWLQFAAEHGVDAVSQSFVVDGDDILAVRKAAEALGYSPFIVAKIERAAALEQLDSILEAADG
IMVARGDLGVEIPIASIALAQRRITRRANQYHRPVITATQMLESMVTSRRPTRAEATDVANAILGGSDCVMLSGESAMGR
YPVESVAMLAAIARSIEPERDRGVIPDGPNDHGEAGHDRAVDLIVRSVFHTAQRRLPQVTLAPTLSGTTARRIACLRLPC
WTVAFTPTPATAQSLQFSYGVEPVEVTEDRSDWNDFARTWLAENDINDGLALLIQGPSGPNPTGNHRLELLELDSPSQGD
APGHT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-55 46
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-66 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-65 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 8e-66 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 8e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TK90_1642 YP_003460873.1 pyruvate kinase VFG0479 Protein 3e-66 41