|
Name : TK90_1619 (TK90_1619) Accession : YP_003460852.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1726235 - 1728928 bp Length : 2694 bp Strand : + Note : KEGG: hha:Hhal_1657 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; SMART: DNA mismatch repair pro DNA sequence : GTGTACATTAATCAGTGTTTCCCCAAGCCCGGATCGACCGCAGCCGAACCGATGAGCACCGCCGAGCCCCTCTCCGCCCA CACCCCGATGATGCAACAGTACCTGGCCATCAAGGCCGAGTACCCGGATACGTTGCTGCTCTACCGCATGGGGGACTTCT ACGAACTGTTCTACGACGACGCCGAGCGCGCCGCGGGGCTGCTCGACATCACCCTGACCCGGCGCGGCGAATCGGCCGGG GCGCCCATCCCGATGGCCGGGATCCCCGTGCACACGCTGGAGAGCTACCTGGCCCGCCTGCTGAAGATGGGCGAGAGCGT CGCCATCTGCGAGCAGACGGGTGCGGTGGGCGCCCAGAAGGGCCCGGTCAAGCGCGAGGTCGTGCGCATCGTGACTCCGG GCACGGTTACCGAGGAAGCCCTGCTGGATGCCCGCCAGGTGAATCGGCTGGTCGCGGTCTGCCCGGCCGCTTCCGCCGCC GTGAAGGGCCGCAAGACGGGCTACGGCATCGCCAGCCTGGAGTTCGCCAGCGGCCAGTTCCGCGTACTGGAGGTCGGCGA CGAAACCGAGCTGGCCGCCGAACTGGCGCGGCTCGACCCGGTGGAACTGCTCGTACCCGATCTGACCGGCGCGATCCCGG GCACCGAGTCCTTCACTCCCCAGCGCCACGCCGACTGGCATTTCGACGCGGTCTCCGCCCATCGCCTGCTGATCACCCAT TTCGGTACCCGCGACCTGTCCGGCTTTGGCTGCGAGGGGCTGGACCTCGGCATCGCCGCCGCCGGCGCCCTGCTCGCCTA CGTGCAGAACCGCCATCGCGGCGATCTCGCACACATCACCAGCCTGGCGCACGAGCAGCGCAGCCAGATGCTGGTGCTGG ACCCGGCCACCCGCCGCAATCTGGAACTCACGCGCACCCTGACGGGCGAGCGCCGCGGTTCTCTGCTCGCCCTGTTGGAC ACAACGCAGTCGGCGATGGGTGCCCGCCGCCTGATGCAGTGGCTGCACCAGCCGCTGCGCGAGCGCGCGATCATCCGCGA GCGCCAGACCGCGATCACCGCCCTGCTGGAACAGGAGGCCGTCACCCCGATCCGCGACGCCCTGGCCGGCTCCGCCGACA GCGAACGCATCCTCTCGCGCATCGTGCTGGGCAGCGCACGCCCGCGCGACCTGACGGCCCTGCTCGCCAGTCTGGAACGC CTGCCGGCCCTGCACGCGGCCCTGACACCGCTGGCCAATGTCGCCGAACGCCTGTCCGCCCTGCATGCCGCACTCGCGCC GGAGGATGACCTGACCGCCCGGCTCGGCGCCGCCCTGGTGGAGGAGCCACCGCTGCGGGTGACCGACGGCGGCATGATCC GCGCGGGTTACGACCCCGAGCTGGATCGCCTGCGCGCGCTGGAAAGCGACGGCGACACCTTCCTGCGGGAGATCGAGGCC CGCGAGCGCGAGGCCACCGGCATCCCCACGCTCAAGGTCGCCTACAACCGCGTGCACGGCTATTACATCGAGGTCTCGCG CAGCCGCTCGGCCGAGCTCCCCGGCCGCTTCATGCGCCGTCAGACACTGAAGAACACCGAGCGCTACACCACCGAGGAAC TCAAGCGCTTCGAGGACGAGATCCTCTCCGCCCGCGAGCAGGCCATGCTCCGCGAGCGCGCGCTGTTCGACGACCTGATC GCCGACCTGCAGGCCCGCGCCCCGCGCCTGCGCACCCTCGCCGACGCCGTAGCCGAGCTGGACGTGCTCGCCTGCCTGGC CGAGCGCGCCGCCCGCCTCGACTGGCACTGCCCGGAGCTGGTCCAGGATCCCGGCATCCATATCGAGCAGGGCCGGCATC CGGTGGTCGAGGCCGGGCTCGATACCCCGTTCGTCGCCAATGACACCGAGCTGGACCCGGAGGCGCGCCGCCTGCTGGTG ATCACCGGTCCCAACATGGGTGGCAAATCCACCTACATGCGTCAGACGGCATTGATCGTGCTGCTCGCGTGCATGGGAAG CTTCGTGCCGGCCGCGCGGGCGCAGATCGGGCCGGTGGACCGCATCTTCACCCGCATCGGCGCCTCCGACGACCTGACAT CCGGGCGTTCGACCTTCATGGTGGAGATGACCGAGGCCGCGAACATCCTGCACAACGCGGGCCCCGAAAGCCTGGTGCTG ATGGACGAGATCGGCCGCGGCACCAGCACCTTCGACGGGCTGGCACTCGCCCTGGCCTGCGCCGAGCGCCTGACGCGCCA CAACCGCGCGCTGACCCTGTTCGCCACGCATTACTTCGAACTGACCGCGCTGGCCGAGCGCGAGCCGGCCGTGGCCAACG TGCACACGGACGCCATGGAGCACGAACACAGCATCGTGTTCCTGCACCAGGTCCGCGAGGGTCCGGCGAATCAGAGTTAC GGGTTGCAGGTGGCGCAGCTGGCCGGCGTCCCGGCCGATGTACTCAAGCTCGCGCGGGAACACCTGCGCGAACTGGAGGA CCGGGCCGCAGCGACGGACTCGCCGCAACTCGGCCTGTTCGCCTCCGCGCCGGACGCAACGACCACGGCCCCCGAGCCGG TTGCCGAGGAGCGGTCTTCGGAAGAACGGGCCCTGAAGGCCCTGTTCGACACCCTGGACCCGGACGAAATGAGCCCGCGC GAGGCCCTGGATGCCCTCTACCGCATGAAGGACGCCCTGCGCGATCGGCAATAG Protein sequence : MYINQCFPKPGSTAAEPMSTAEPLSAHTPMMQQYLAIKAEYPDTLLLYRMGDFYELFYDDAERAAGLLDITLTRRGESAG APIPMAGIPVHTLESYLARLLKMGESVAICEQTGAVGAQKGPVKREVVRIVTPGTVTEEALLDARQVNRLVAVCPAASAA VKGRKTGYGIASLEFASGQFRVLEVGDETELAAELARLDPVELLVPDLTGAIPGTESFTPQRHADWHFDAVSAHRLLITH FGTRDLSGFGCEGLDLGIAAAGALLAYVQNRHRGDLAHITSLAHEQRSQMLVLDPATRRNLELTRTLTGERRGSLLALLD TTQSAMGARRLMQWLHQPLRERAIIRERQTAITALLEQEAVTPIRDALAGSADSERILSRIVLGSARPRDLTALLASLER LPALHAALTPLANVAERLSALHAALAPEDDLTARLGAALVEEPPLRVTDGGMIRAGYDPELDRLRALESDGDTFLREIEA REREATGIPTLKVAYNRVHGYYIEVSRSRSAELPGRFMRRQTLKNTERYTTEELKRFEDEILSAREQAMLRERALFDDLI ADLQARAPRLRTLADAVAELDVLACLAERAARLDWHCPELVQDPGIHIEQGRHPVVEAGLDTPFVANDTELDPEARRLLV ITGPNMGGKSTYMRQTALIVLLACMGSFVPAARAQIGPVDRIFTRIGASDDLTSGRSTFMVEMTEAANILHNAGPESLVL MDEIGRGTSTFDGLALALACAERLTRHNRALTLFATHYFELTALAEREPAVANVHTDAMEHEHSIVFLHQVREGPANQSY GLQVAQLAGVPADVLKLAREHLRELEDRAAATDSPQLGLFASAPDATTTAPEPVAEERSSEERALKALFDTLDPDEMSPR EALDALYRMKDALRDRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-179 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TK90_1619 | YP_003460852.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 52 |
