Gene Information

Name : TK90_1572 (TK90_1572)
Accession : YP_003460805.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1667455 - 1668621 bp
Length : 1167 bp
Strand : -
Note : KEGG: tau:Tola_2842 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAAATCGCAGTCGCCGGAACCGGCTATGTCGGGCTCTCCAATGCCGTCCTGCTCGCGCAGCACCACGAGGTGGTGGC
GCTGGACGTGGTGCCGGAGAAAGTCGAGCAGATCAACCGCAGGCAGTCCCCGATCATCGACGCCGAGATCCAGGATTTCC
TCGAGAACCGCGAGCTGAACCTCAAGGCTACGCTGGACAAGCAGGAGGCGTTCGCCGACGCGGACTTCATCATCATCGCG
ACTCCCACGGACTACGACCCGCAGACCAACTACTTCAACACCTCCACGGTGGAGTCGGTCATCCGCGACGTACTGGCGGC
CAACCCACAGGCCACCATGGTCATCAAGTCCACCGTGCCGGTCGGCTACACGCGCGAGATCAAGGCGCAGATGGAAACCG
ACAACATCCTGTTCTCGCCGGAGTTCCTGCGCGAGGGCAGGGCGCTGTACGACAACCTGCACCCCTCGCGGATTATCGTC
GGCGAACAGTCCGAACGGGCCGAGACCTTCGCCGGCCTGCTGGCCGAAGGGGCGGTGGACGACGACATCCCGATCCTGTT
CACCAATTCCACCGAGGCCGAGGCGATCAAGCTGTTCGCCAACACGTATCTGGCCATGCGCGTGGCCTACTTCAACGAGC
TGGACAGCTACGCCGAGATCCACGGCCTGGATACCCGCCAGATCATCGACGGTGTGTGCCTGGACCCGCGCATCGGCAGC
CACTACAACAACCCGTCCTTCGGCTACGGTGGCTACTGCCTGCCGAAGGACACCAAGCAGCTGCTGGCCAACTACGACGA
GATCCCCAACAACATCATCGGCGCCATCGTCGATGCCAACCGCACCCGCAAGGACTTCGTCGCCGATGCCATCATCCGCC
GCAACCCCAAGGTCGTCGGCATCTACCGCCTGGTGATGAAGAGCGGCTCCGACAACTTCCGCGCCTCCGCCATCCAGGGC
GTAATGAAGCGCATCAAGGCCAAGGGCATCGAGGTTGTCGTGTACGAGCCGGAGCTGCCCGACGACGAGTTCTACCGCTC
CCGCGTCATCCGCGATCTCGACGAGTTCAAGCGCGTGTCCGACGTCATCGTCGCCAACCGCATCACCGACGACATCCGCG
ACCAGACCGACAAGATCTACACCCGCGACCTCTTCAACAGCGATTGA

Protein sequence : 
MKIAVAGTGYVGLSNAVLLAQHHEVVALDVVPEKVEQINRRQSPIIDAEIQDFLENRELNLKATLDKQEAFADADFIIIA
TPTDYDPQTNYFNTSTVESVIRDVLAANPQATMVIKSTVPVGYTREIKAQMETDNILFSPEFLREGRALYDNLHPSRIIV
GEQSERAETFAGLLAEGAVDDDIPILFTNSTEAEAIKLFANTYLAMRVAYFNELDSYAEIHGLDTRQIIDGVCLDPRIGS
HYNNPSFGYGGYCLPKDTKQLLANYDEIPNNIIGAIVDANRTRKDFVADAIIRRNPKVVGIYRLVMKSGSDNFRASAIQG
VMKRIKAKGIEVVVYEPELPDDEFYRSRVIRDLDEFKRVSDVIVANRITDDIRDQTDKIYTRDLFNSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-88 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TK90_1572 YP_003460805.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-98 53