|
Name : TK90_1550 (TK90_1550) Accession : YP_003460787.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1650494 - 1651768 bp Length : 1275 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bpt:Bpet4030 polysaccharide biosynthesis protein DNA sequence : ATGGCTGTTGGCGAAGGGAAAATTGCGGTGATCGGCCTGGGCTACGTCGGCCTTCCGCTGGCAGTGGCTTTTGGTGCGAA GCGCCCGGTGGTGGGGTTCGACGTGAACGCGGCGCGGGTGGCTGCGCTGAGGGCGGGGCATGACGACACGCTGGAGGTGC CCGACGGGGAACTGACGGCGGCGGAGCATCTGCGGGTAACGGACGATGCGGCGGCGCTGGCGGAGTGCAACGTGTTTATC GTGACGGTGCCTACCCCCATCGATTCCCACCGGCGCCCGGATTTGGGCCCGCTGCTGGCAGCTAGTGAGACGGTTGGACG TGCACTTTCGCCGGGGGGCGTGGTGGTTTATGAGTCTACGGTTTACCCGGGCGCGACTGAGGAAGACTGCATCCCGGTCG TGGAGCGGGTCTCGGGGCTCACGTACAATCGGGACTTTTTCGCCGGCTACAGCCCCGAGCGGGTGAATCCGGGTGACCGG GAACACCGCGTGACCACGATCCAGAAGGTGACGTCCGGTTCTACGCCGGAGGTCGCGGAGTTTGTGGATGCGCTCTATCG CGAGGTGATCACAGCCGGCACATACAGGGCCAGCAGTATCCGAGTGGCGGAGGCAGCCAAGGTGATCGAGAACACGCAGC GGGATGTGAACATCGCGCTGATCAATGAGCTGGCGATTCTGTTCAACCGCTTGGGGATCGATACACAGGAGGTTCTGGAG GCGGCTGGTTCGAAGTGGAATTTTCTCCCGTTCCGTCCCGGACTGGTGGGTGGCCATTGTATCGGGGTGGATCCGTACTA CCTCACGCATAAGGCGCAGCAGATCGGGCATCACCCGGAGATTATCCTGGCCGGGCGGCGGCTGAACGACGGCATGGGCG CGTATGTGGTGGGCGAGTTGGTGAAGGCGATGATGCGCAAGGGTACACGCGTGCAAGGTGGGCGCGTGCTGGTGATGGGA CTCACGTTCAAGGAGAACACTCCGGATCTGCGTAACAGCCGGGCGGTTGATGTGGTACGCGAGCTGGAGAGCTATGGGCT GGCGGTGGACGCATTTGACCCTTGGGTAAACCCGGCAGAGGCCGAGCACGAGCTGGACATCGTTCCCATCGCGGAACCGG AAGGTGGCGCCTACGACGCAATCGTGGTGGCGGTGGCCCATCGCGAGTTCCGCGAGCTGGGCGCGCAGGGCATCCGCGCC TTCGGCCGTGACCCGCATGTGCTGTACGACCTGAAATACCTGTTACCGAAGGGAGAGGCGGATATTCGCCTGTAG Protein sequence : MAVGEGKIAVIGLGYVGLPLAVAFGAKRPVVGFDVNAARVAALRAGHDDTLEVPDGELTAAEHLRVTDDAAALAECNVFI VTVPTPIDSHRRPDLGPLLAASETVGRALSPGGVVVYESTVYPGATEEDCIPVVERVSGLTYNRDFFAGYSPERVNPGDR EHRVTTIQKVTSGSTPEVAEFVDALYREVITAGTYRASSIRVAEAAKVIENTQRDVNIALINELAILFNRLGIDTQEVLE AAGSKWNFLPFRPGLVGGHCIGVDPYYLTHKAQQIGHHPEIILAGRRLNDGMGAYVVGELVKAMMRKGTRVQGGRVLVMG LTFKENTPDLRNSRAVDVVRELESYGLAVDAFDPWVNPAEAEHELDIVPIAEPEGGAYDAIVVAVAHREFRELGAQGIRA FGRDPHVLYDLKYLLPKGEADIRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-141 | 63 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-141 | 63 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-110 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TK90_1550 | YP_003460787.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 8e-142 | 63 |
