Gene Information

Name : TK90_1539 (TK90_1539)
Accession : YP_003460777.1
Strain : Thioalkalivibrio sp. K90mix
Genome accession: NC_013889
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1638466 - 1639017 bp
Length : 552 bp
Strand : -
Note : PFAM: sugar transferase; KEGG: net:Neut_0185 sugar transferase

DNA sequence : 
TTGATACGGGTTCTGGATGTGGTGCTGTCGGTTTTGGGGTTGATTGTGGCGGTGCCGTTGATGTTGGTGTTGTGGATTGC
GCTTTGGTGGGTTGCGCGTTCGCCGCTGTTTCGGCAGGAGCGTGTGGGGCGGTATCAGCGGCCGTTTGTGCTGGTGAAGT
TTCGGACGATGCGGCCGGATACGGCGTCGGTGGCGACGCATCTGGCGCAGGCTTCGTCGATTACGCGCTTGGGCCACTTT
CTGCGCAAAACGAAGCTGGATGAGTTGCCGCAGCTTTGGAATGTGCTGAAGGGGGAGATGAGCCTGGTGGGGCCGCGGCC
TTGTCTGGTGAGTCAGGTGGAGTTGATCGCGGCGCGGGAGGCGCGTGGCGTGTTTGCGGTGCGCCCGGGCATTACCGGGC
TGGCGCAGGTGAACGGGATCGATATGTCGGACCCCGAGAGGCTGGCCGAGATGGATGCGAAGATGATTGAGTCGCTGACG
CTTGTGAGTTATTTCCGGTATCTGGTTTTGACGGTTACGGGGAAGGGTTCTGGGGATCGGGTTCGGGGTTAA

Protein sequence : 
MIRVLDVVLSVLGLIVAVPLMLVLWIALWWVARSPLFRQERVGRYQRPFVLVKFRTMRPDTASVATHLAQASSITRLGHF
LRKTKLDELPQLWNVLKGEMSLVGPRPCLVSQVELIAAREARGVFAVRPGITGLAQVNGIDMSDPERLAEMDAKMIESLT
LVSYFRYLVLTVTGKGSGDRVRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 8e-28 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 9e-26 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TK90_1539 YP_003460777.1 sugar transferase VFG1309 Protein 2e-25 48