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Name : TK90_1393 (TK90_1393) Accession : YP_003460635.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1486623 - 1487438 bp Length : 816 bp Strand : - Note : PFAM: integrase; KEGG: cja:CJA_1427 transposase DNA sequence : GTGACCCTGCTGTGCCGGACCCTGCGGGTCTCCCGGAGTGGATTCTACCAATGGCGCCAGCGCGAGGATGCGGCTGATCC GATCCATGCCGAGCTGCTGTGGCATGTGCGTTCGGTGGACCAGCACTTACGCCACCGAGCGGGGAGCCGCCGGATGGCAT ATGAGCTGCGCCAACGGGACTTTGCCGTGGGACGGCACCGGGCTCGGAGCCTGATGCGGGAAGCCGGTCTCGAGTGTCAG CAGCGCCGTCGGCGGTGGATCTCGACGACCGACAGTCAGCACCGCTTACCGGTGGCCCCGAACGTGCTGCGGCGCCAGTT CCGGGCTGAAGGGCCCAACGAGATCTGGGTGGCCGATATCACGGCGCTGTGGACCTTCGAAGGCTGGGTCTATCTGGCGG CGATCCTGGACCTGTATGACCACCAGGTCATCGGTTATGCCCTGGCCGACGGCATGCCGGTGGAGCTGACCCTGGAGGCG CTGGAGATGGCGGTCCGGCACCGGCGACCGGCGCCGGGGCTCATCCATCACTCGGATCAGGGTAGCCAGTATGCCGCCAC GCGCTACCAGGAACGGCTGGATGCGTTGGGCTTCGTGCCCTCCATGAGCCGCAAGGGCAACTGCTGGGACAACGCGGTGA TGGAGCGCTTCTTCGGCGCACTGAAAAGCGAGTGGACCGACGCCCGGACCTACCGTACCCGCGAGGCCGCCCGACTGGAT GTCGTGGAGTACATCGAAATGCAGTACAACAGCGTCCGACCCCACACGGCCCTGGGCCAACTTACCCCCCGGGAGTGGGA AAAGGCTGTTGCTTAG Protein sequence : MTLLCRTLRVSRSGFYQWRQREDAADPIHAELLWHVRSVDQHLRHRAGSRRMAYELRQRDFAVGRHRARSLMREAGLECQ QRRRRWISTTDSQHRLPVAPNVLRRQFRAEGPNEIWVADITALWTFEGWVYLAAILDLYDHQVIGYALADGMPVELTLEA LEMAVRHRRPAPGLIHHSDQGSQYAATRYQERLDALGFVPSMSRKGNCWDNAVMERFFGALKSEWTDARTYRTREAARLD VVEYIEMQYNSVRPHTALGQLTPREWEKAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 3e-47 | 45 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 3e-47 | 45 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 2e-47 | 45 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 9e-48 | 45 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 9e-48 | 45 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 5e-47 | 45 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 3e-47 | 44 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 5e-47 | 44 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 3e-47 | 44 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 8e-38 | 42 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 8e-38 | 42 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 8e-38 | 42 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 1e-38 | 42 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 6e-39 | 42 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 3e-33 | 41 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 8e-34 | 41 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 8e-34 | 41 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 4e-33 | 41 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 1e-32 | 41 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-32 | 41 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 8e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TK90_1393 | YP_003460635.1 | integrase | VFG1706 | Protein | 1e-47 | 45 |
| TK90_1393 | YP_003460635.1 | integrase | VFG0785 | Protein | 2e-33 | 41 |
