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Name : TK90_1232 (TK90_1232) Accession : YP_003460477.1 Strain : Thioalkalivibrio sp. K90mix Genome accession: NC_013889 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1307639 - 1308997 bp Length : 1359 bp Strand : + Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: lhk:LHK_01738 DnaB DNA sequence : ATGACTGCCATGACTGCACCGTGGTCACTGGAAGCCGAGCAGGCCGTTATCGGCGGCCTGCTGATCGACAACGGCGCCTG GGATGACGTGCGCGACCTGGTGGACGAGCCGGACTTCTACCGCCGGGACCACCGGCTGATTTGGCGCGCCATGCGGGCGC TGGATGACGTGGGCACCCCGTTGGACATCATCACCCTGGCGGAATGGCTGGAGTCGCACGACCAGATGGAGGAAGCCGGC GGCATGGCCTACCTCGGCACCTTGGCGACCGACACCCCCAGCGCGGCCAACGTTCGCGCCTACGCAGCCATTGTCCGTGA CAAGGCCCGGCGGCGCTCCCTGATCCAGGCGGCGGGTGAAATCCAGCGCGCCGCCGCCAGCGGTGATGACACCGCCACCG TCATGGACGAAGCCCAGCGCCTGGTCATGGCCGTGGGCGAATCCGGTGGAGACGGTCCGGTCGAGATCGGCCAGGACATC CACGGCTGGCTGACGGACCTGGAGCGCCGGCGGCGGACGGGCGAGTCGGCCGGGATCACTACCGGCTTCACCGACCTGGA CCGAAAGACAACGGGGCTTCATCCGGGCGACTACGTGGTTATCGCGGGCCGGCCGTCGATGGGCAAAACCGCTCTCAGCC TGGGCATGGCGGAGCATATCGCGGCCACCCACGGGCCGGTCGTGGTGTTCAGCCTCGAAATGCCCAAGTCGCAGCTATGG GCGCGCCTGGTGGCGTCGCACACAGGCATCGCGCTACCGGCATTCCGAGCGCCCCACCTGCACCCCTACGGCGATCCGGC GGCGGACTCAATCCGGCGCACGGTTCAGCGGTTGCAATCGCTCCCGCTCCACGTCGATGACTCCAGCCGGGTGACGACCA GCGACATACGCGCCCGGGCCCGCCGGCTGAAGCGAAAGCATGGGCTTACGGCCGTGGTCGTGGATTACATCGGACTGGTG ACCCCACCGGCCAGGGAATCCAGGAACCACGAAATCGAGGTCATCAGTCGCGACCTGAAATCGTTGGCCCTGGAGCTTGG CGTGCCGGTGCTGGCCCTGTCGCAGTTGAACCGAGGACTGGAGCAACGGCCGGACAAGCGCCCGATCATGTCCGACCTGC GGGACTCCGGCAGCCTTGAGCAGGACGCGGACCTGGTTCTGCTGCTTTACCGCGACGAGGTGTACCGGGAGCGAACCCCC GACCGGGGCATTGCCGAGATCATCATCGGCAAGCAGCGGAACGGCGAAACCGGAACCGTGCCGCTGGCCTTCCGTGGCGA GGTGACCCGGTTCGGAGACCTGGACCATCAGACCAGGGCCGCCTGGCTCAGGGAGCGCCGCCGGGCGCGTGGTGAGTGA Protein sequence : MTAMTAPWSLEAEQAVIGGLLIDNGAWDDVRDLVDEPDFYRRDHRLIWRAMRALDDVGTPLDIITLAEWLESHDQMEEAG GMAYLGTLATDTPSAANVRAYAAIVRDKARRRSLIQAAGEIQRAAASGDDTATVMDEAQRLVMAVGESGGDGPVEIGQDI HGWLTDLERRRRTGESAGITTGFTDLDRKTTGLHPGDYVVIAGRPSMGKTALSLGMAEHIAATHGPVVVFSLEMPKSQLW ARLVASHTGIALPAFRAPHLHPYGDPAADSIRRTVQRLQSLPLHVDDSSRVTTSDIRARARRLKRKHGLTAVVVDYIGLV TPPARESRNHEIEVISRDLKSLALELGVPVLALSQLNRGLEQRPDKRPIMSDLRDSGSLEQDADLVLLLYRDEVYRERTP DRGIAEIIIGKQRNGETGTVPLAFRGEVTRFGDLDHQTRAAWLRERRRARGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-78 | 45 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-74 | 43 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-74 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-77 | 43 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-76 | 43 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-77 | 43 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 8e-75 | 41 |
